Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5020: 13388 - K20178 VPS8 vacuolar protein sorting-associated protein 8, at 1563647 to 1569301 13388 mRNA_5021: 13389 - K14347 SLC10A7, P7 solute carrier family 10 (sodium/bile acid cotransporter), member 7, at 1569492 to 1571260 13389 mRNA_5022: 13390 - Hypothetical Protein, at 1571502 to 1572574 13390 mRNA_5023: 13391 - K17866 DPH2 diphthamide biosynthesis protein 2, at 1572815 to 1575164 13391 mRNA_5024: 13392 - K11124 SMG6, EST1A protein SMG6, at 1575656 to 1580280 13392
Group Condition mRNA_5020 mRNA_5021 mRNA_5022 mRNA_5023 mRNA_5024
13388
13389
13390
13391
13392
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.5 -0.1 0.3 -2.3
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.0 -0.4 -0.3 -0.3
growth on oleic acid YNB Glucose -0.5 -0.0 -0.6 -0.3 0.3
auxotrophy YNB Glucose -0.3 0.2 -0.4 -0.8 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.4 -0.3 0.2 0.1 0.3
facs on lipid accumulation Sorted Low BODIPY Gate -1.4 0.3 0.6 -0.7 0.2
growth on ypd YPD 0.3 0.0 -0.5 -0.1 -0.7
auxotrophy YNB Glucose 75mM Arginine -0.8 0.4 -0.3 -0.4 0.4
growth on oleic acid YNB Oleic Acid -0.9 0.1 -0.2 -0.4 0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 0.5 0.0 -1.4 0.5
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -0.0 0.0 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -1.2 0.8 0.3 -0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.1 -0.2 -0.4 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.8 0.5 -0.2 -0.3 -1.1
auxotrophy Dropout Complete -0.1 0.0 -0.5 -0.0 0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 0.2 -0.4 0.1 0.5
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 0.5 -0.1 -0.5 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.0 0.0 -0.1 -0.3 0.4
growth on ricinoleic acid YNB Glucose 1.0 0.4 -0.3 -0.5 0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 0.1 0.5 0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.1 0.9 0.1 0.3
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