Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5017: 13385 - K08963 mtnA methylthioribose-1-phosphate isomerase, at 1557007 to 1558590 13385 mRNA_5018: 13386 - Hypothetical Protein, at 1558748 to 1560542 13386 mRNA_5019: 13387 - HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 1560613 to 1563320 13387 mRNA_5020: 13388 - K20178 VPS8 vacuolar protein sorting-associated protein 8, at 1563647 to 1569301 13388 mRNA_5021: 13389 - K14347 SLC10A7, P7 solute carrier family 10 (sodium/bile acid cotransporter), member 7, at 1569492 to 1571260 13389
Group Condition mRNA_5017 mRNA_5018 mRNA_5019 mRNA_5020 mRNA_5021
13385
13386
13387
13388
13389
facs on lipid accumulation Sorted Low BODIPY Gate -1.4 -0.1 -0.3 -1.4 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 -0.1 -0.3 -1.4 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -1.5 -0.2 -0.3 -1.2 0.8
auxotrophy YNB Glucose 75mM Arginine -0.7 -0.1 0.2 -0.8 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 -0.0 -0.2 -0.1 -0.1
growth on oleic acid YNB Glucose -0.1 0.0 -0.2 -0.5 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -0.2 0.1 -0.3 0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 -0.3 -0.1 0.3 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.3 0.3 -0.7 -0.5
auxotrophy YNB Glucose -0.3 -0.2 0.2 -0.3 0.2
facs on lipid accumulation Sorted High BODIPY Gate -1.1 -0.2 -0.2 0.8 0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.8 -0.2 -0.3 1.0 0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 0.1 0.1 -0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.0 0.0 0.0 -0.1
auxotrophy Dropout Complete 0.3 -0.3 0.0 -0.1 0.0
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.1 0.0 -0.0 -0.1
growth on oleic acid YNB Oleic Acid 0.5 0.3 0.0 -0.9 0.1
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.2 0.2 -0.1 0.2
growth on ricinoleic acid YNB Glucose -0.3 -0.3 -0.0 1.0 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 0.1 0.4 0.5
growth on ypd YPD 1.4 0.0 -0.1 0.3 0.0
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