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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5012: 13380 - K01886 QARS, glnS glutaminyl-tRNA synthetase, at 1542746 to 1545688
13380
mRNA_5013: 13381 - BLAST regulatory protein wetA [Paracoccidioides lutzii ..., at 1545921 to 1548060
13381
mRNA_5014: 13382 - K01621 xfp, xpk xylulose-5-phosphate/fructose-6-phosphate phosphoketolase, at 1549250 to 1553078
13382
mRNA_5015: 13383 - K00925 ackA acetate kinase, at 1553559 to 1555008
13383
mRNA_5016: 13384 - BLAST UPF0643 protein PB2B2.08 [Hypsizygus marmoreus], at 1555727 to 1556735
13384
Group
Condition
mRNA_5012
mRNA_5013
mRNA_5014
mRNA_5015
mRNA_5016
13380
13381
13382
13383
13384
facs on lipid accumulation
Sorted No BODIPY Gate
-1.8
0.1
0.0
0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.9
0.1
-0.4
-0.2
-0.0
growth on ypd
YPD
-0.8
-0.2
0.1
-0.3
0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.0
0.4
-0.2
-0.2
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
0.2
-0.3
0.0
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.4
0.1
-0.1
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.4
0.3
-0.2
-0.4
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
0.0
0.6
-0.6
-0.2
auxotrophy
Dropout Complete
-0.1
0.5
-0.4
-0.5
0.1
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.1
0.3
-0.3
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
0.5
-0.3
0.3
0.1
auxotrophy
YNB Glucose
0.1
0.7
-0.4
-0.4
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.1
0.1
-0.5
0.4
growth on oleic acid
YNB Glucose
0.1
0.2
-0.1
0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.1
0.4
-0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.4
0.1
0.1
-0.2
0.1
growth on oleic acid
YNB Oleic Acid
-0.3
0.2
-0.2
0.2
0.5
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.5
-0.3
-0.1
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.3
0.2
-0.1
0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.6
0.5
-0.1
-0.4
0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.6
0.0
0.2
-0.2
0.8
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