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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5006: 13374 - K20299 VPS53 vacuolar protein sorting-associated protein 53, at 1525001 to 1528336
13374
mRNA_5007: 13375 - Hypothetical Protein, at 1528633 to 1529200
13375
mRNA_5008: 13376 - KOG2319 Vacuolar assembly/sorting protein VPS9, at 1530347 to 1531248
13376
mRNA_5009: 13377 - K07195 EXOC7, EXO70 exocyst complex component 7, at 1531296 to 1533936
13377
mRNA_5010: 13378 - K17576 PPP1R37, LRRC68 protein phosphatase 1 regulatory subunit 37, at 1534443 to 1540178
13378
Group
Condition
mRNA_5006
mRNA_5007
mRNA_5008
mRNA_5009
mRNA_5010
13374
13375
13376
13377
13378
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
0.1
-0.3
-0.4
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
0.1
-0.2
-0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.2
-0.5
-0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.1
-0.5
0.1
0.0
growth on ricinoleic acid
YNB Glucose
-0.2
-0.4
-0.3
-0.0
0.5
auxotrophy
YNB Glucose
-0.0
-0.3
-0.4
-0.2
0.6
auxotrophy
Dropout Complete
0.1
-0.4
-0.5
0.1
0.4
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.1
-0.3
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.0
-0.5
-0.1
0.5
auxotrophy
YNB Glucose 75mM Methionine
0.0
-0.3
-0.3
-0.1
0.5
growth on oleic acid
YNB Glucose
-0.0
-0.3
-0.4
0.1
0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
0.7
-0.2
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
-0.1
0.2
0.1
0.5
growth on oleic acid
YNB Oleic Acid
0.4
-0.3
-0.5
0.1
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.1
0.3
-0.2
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
0.1
-0.1
-0.1
0.4
growth on ypd
YPD
0.1
0.3
-0.1
-0.2
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.2
0.8
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.1
0.7
0.1
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.2
0.7
-0.1
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
0.3
0.6
0.1
0.3
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