Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5006: 13374 - K20299 VPS53 vacuolar protein sorting-associated protein 53, at 1525001 to 1528336 13374 mRNA_5007: 13375 - Hypothetical Protein, at 1528633 to 1529200 13375 mRNA_5008: 13376 - KOG2319 Vacuolar assembly/sorting protein VPS9, at 1530347 to 1531248 13376 mRNA_5009: 13377 - K07195 EXOC7, EXO70 exocyst complex component 7, at 1531296 to 1533936 13377 mRNA_5010: 13378 - K17576 PPP1R37, LRRC68 protein phosphatase 1 regulatory subunit 37, at 1534443 to 1540178 13378
Group Condition mRNA_5006 mRNA_5007 mRNA_5008 mRNA_5009 mRNA_5010
13374
13375
13376
13377
13378
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 0.1 -0.3 -0.4 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 0.1 -0.2 -0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 0.2 -0.5 -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 -0.5 0.1 0.0
growth on ricinoleic acid YNB Glucose -0.2 -0.4 -0.3 -0.0 0.5
auxotrophy YNB Glucose -0.0 -0.3 -0.4 -0.2 0.6
auxotrophy Dropout Complete 0.1 -0.4 -0.5 0.1 0.4
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.1 -0.3 -0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.0 -0.5 -0.1 0.5
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.3 -0.3 -0.1 0.5
growth on oleic acid YNB Glucose -0.0 -0.3 -0.4 0.1 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.1 0.7 -0.2 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.1 0.2 0.1 0.5
growth on oleic acid YNB Oleic Acid 0.4 -0.3 -0.5 0.1 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.1 0.3 -0.2 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 0.1 -0.1 -0.1 0.4
growth on ypd YPD 0.1 0.3 -0.1 -0.2 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.2 0.8 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.1 0.7 0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.2 0.7 -0.1 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 0.3 0.6 0.1 0.3
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