Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5005: 13373 - K10956 SEC61A protein transport protein SEC61 subunit alpha, at 1522802 to 1524731 13373 mRNA_5006: 13374 - K20299 VPS53 vacuolar protein sorting-associated protein 53, at 1525001 to 1528336 13374 mRNA_5007: 13375 - Hypothetical Protein, at 1528633 to 1529200 13375 mRNA_5008: 13376 - KOG2319 Vacuolar assembly/sorting protein VPS9, at 1530347 to 1531248 13376 mRNA_5009: 13377 - K07195 EXOC7, EXO70 exocyst complex component 7, at 1531296 to 1533936 13377
Group Condition mRNA_5005 mRNA_5006 mRNA_5007 mRNA_5008 mRNA_5009
13373
13374
13375
13376
13377
ypd buoyancy 40 hrs No Buoyancy Separation -1.8 -0.1 0.1 -0.3 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.6 -0.2 0.2 -0.5 -0.1
growth on oleic acid YNB Glucose -0.1 -0.0 -0.3 -0.4 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.3 -0.0 -0.2 0.8 -0.0
growth on ricinoleic acid YNB Glucose 0.2 -0.2 -0.4 -0.3 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.2 -0.1 -0.5 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.6 -0.1 0.2 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 -0.1 -0.1 0.7 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 -0.5 0.1 -0.2 -0.1
auxotrophy YNB Glucose 0.7 -0.0 -0.3 -0.4 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.5 0.0 -0.3 -0.3 -0.1
growth on ypd YPD -0.4 0.1 0.3 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 0.1 -0.1 0.3 -0.2
auxotrophy Dropout Complete 0.5 0.1 -0.4 -0.5 0.1
auxotrophy YNB Glucose 75mM Arginine 0.6 -0.0 -0.0 -0.5 -0.1
growth on oleic acid YNB Oleic Acid 0.2 0.4 -0.3 -0.5 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.0 0.1 -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.1 0.1 -0.3 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.3 0.3 0.6 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.0 -0.2 0.2 0.7 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.1 0.1 0.7 0.1
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