Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5002: 13370 - K02981 RP-S2e, RPS2 small subunit ribosomal protein S2e, at 1513605 to 1514626 13370 mRNA_5003: 13371 - Hypothetical Protein, at 1515241 to 1515824 13371 mRNA_5004: 13372 - K12848 SNU23 U4/U6.U5 tri-snRNP component SNU23, at 1516047 to 1517117 13372 mRNA_5005: 13373 - K10956 SEC61A protein transport protein SEC61 subunit alpha, at 1522802 to 1524731 13373 mRNA_5006: 13374 - K20299 VPS53 vacuolar protein sorting-associated protein 53, at 1525001 to 1528336 13374
Group Condition mRNA_5002 mRNA_5003 mRNA_5004 mRNA_5005 mRNA_5006
13370
13371
13372
13373
13374
ypd buoyancy 40 hrs No Buoyancy Separation   0.2   -1.8 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.1   -1.3 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.0   -0.7 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate   0.2   -0.2 -0.6
ypd buoyancy 40 hrs High Buoyancy   0.3   -0.6 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.3   -0.4 0.1
growth on ypd YPD   -0.1   -0.4 0.1
facs on lipid accumulation Sorted No BODIPY Gate   0.0   -0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.2   0.1 -0.1
growth on ricinoleic acid YNB Glucose   -0.2   0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate   -0.0   0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy   0.0   0.0 -0.2
growth on oleic acid YNB Glucose   0.0   -0.1 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.2   0.2 0.0
growth on ricinoleic acid YNB Ricinoleic Acid   0.3   0.4 -0.5
auxotrophy YNB Glucose 75mM Arginine   -0.3   0.6 -0.0
auxotrophy YNB Glucose 75mM Methionine   0.1   0.5 0.0
auxotrophy YNB Glucose   0.0   0.7 -0.0
ypd buoyancy 40 hrs Median Buoyancy   0.4   0.2 0.1
auxotrophy Dropout Complete   0.1   0.5 0.1
growth on oleic acid YNB Oleic Acid   0.1   0.2 0.4
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