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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5000: 13368 - K16302 CNNM metal transporter CNNM, at 1505561 to 1508084
13368
mRNA_5001: 13369 - K00649 GNPAT glyceronephosphate O-acyltransferase, at 1508431 to 1511895
13369
mRNA_5002: 13370 - K02981 RP-S2e, RPS2 small subunit ribosomal protein S2e, at 1513605 to 1514626
13370
mRNA_5003: 13371 - Hypothetical Protein, at 1515241 to 1515824
13371
mRNA_5004: 13372 - K12848 SNU23 U4/U6.U5 tri-snRNP component SNU23, at 1516047 to 1517117
13372
Group
Condition
mRNA_5000
mRNA_5001
mRNA_5002
mRNA_5003
mRNA_5004
13368
13369
13370
13371
13372
growth on oleic acid
YNB Glucose
-0.8
-0.1
0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
-0.3
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.4
0.1
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
0.0
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
0.0
0.0
auxotrophy
YNB Glucose
-0.4
0.0
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
0.3
-0.3
growth on ypd
YPD
-0.2
0.0
-0.1
growth on ricinoleic acid
YNB Glucose
0.1
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
-0.0
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
0.2
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
-0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.3
0.2
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.1
0.3
auxotrophy
Dropout Complete
-0.0
0.1
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
0.2
0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.0
0.4
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.2
0.3
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