Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4998: 13366 - KOG4169 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases, at 1503499 to 1504533 13366 mRNA_4999: 13367 - Hypothetical Protein, at 1504901 to 1505364 13367 mRNA_5000: 13368 - K16302 CNNM metal transporter CNNM, at 1505561 to 1508084 13368 mRNA_5001: 13369 - K00649 GNPAT glyceronephosphate O-acyltransferase, at 1508431 to 1511895 13369 mRNA_5002: 13370 - K02981 RP-S2e, RPS2 small subunit ribosomal protein S2e, at 1513605 to 1514626 13370
Group Condition mRNA_4998 mRNA_4999 mRNA_5000 mRNA_5001 mRNA_5002
13366
13367
13368
13369
13370
facs on lipid accumulation Sorted Low BODIPY Gate -0.2   -0.7 -0.3  
growth on oleic acid YNB Glucose -0.1   -0.8 -0.1  
auxotrophy YNB Glucose 75mM Arginine -0.2   -0.4 0.1  
auxotrophy YNB Glucose -0.0   -0.4 0.0  
ypd buoyancy 40 hrs Median Buoyancy -0.2   -0.3 -0.0  
growth on ricinoleic acid YNB Ricinoleic Acid -0.2   -0.1 -0.1  
ypd buoyancy 40 hrs Low Buoyancy -0.1   -0.1 -0.1  
facs on lipid accumulation Sorted No BODIPY Gate 0.2   -0.4 0.0  
auxotrophy YNB Glucose 75mM Methionine -0.1   -0.3 0.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2   0.2 -0.2  
facs on lipid accumulation Sorted High BODIPY Gate 0.2   -0.5 0.0  
ypd buoyancy 40 hrs High Buoyancy -0.1   -0.2 0.2  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1   0.0 -0.0  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0   -0.3 0.2  
growth on oleic acid YNB Oleic Acid 0.1   -0.1 -0.1  
auxotrophy Dropout Complete -0.1   -0.0 0.1  
ypd buoyancy 40 hrs No Buoyancy Separation -0.0   -0.2 0.2  
growth on ricinoleic acid YNB Glucose 0.1   0.1 -0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1   0.3 -0.2  
growth on ypd YPD 0.2   -0.2 0.0  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3   -0.4 0.3  
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