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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Number of genes on each side:
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4989: 13357 - Hypothetical Protein, at 1485685 to 1486453
13357
mRNA_4990: 13358 - K00354 E1.6.99.1 NADPH2 dehydrogenase, at 1486606 to 1488181
13358
mRNA_4991: 13359 - Hypothetical Protein, at 1488535 to 1491302
13359
mRNA_4992: 13360 - Hypothetical Protein, at 1492258 to 1494685
13360
mRNA_4993: 13361 - K20660 CYP709 cytochrome P450, family 709, at 1494883 to 1497041
13361
Group
Condition
mRNA_4989
mRNA_4990
mRNA_4991
mRNA_4992
mRNA_4993
13357
13358
13359
13360
13361
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
-0.5
0.1
-1.5
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.4
0.1
-0.3
0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.1
0.0
-0.2
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
0.0
0.0
-0.1
-0.1
growth on oleic acid
YNB Glucose
0.1
-0.4
0.2
-0.0
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.5
-0.3
-0.0
0.2
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
0.3
0.0
-0.1
0.1
growth on ricinoleic acid
YNB Glucose
0.2
-0.4
0.1
0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.3
0.2
0.2
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.7
-0.7
0.2
0.5
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.1
0.0
0.8
-0.1
growth on ypd
YPD
-0.5
-0.1
0.8
1.0
-0.6
ypd buoyancy
40 hrs High Buoyancy
0.0
0.1
-0.1
0.4
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
0.7
-0.2
0.5
0.2
auxotrophy
Dropout Complete
0.0
-0.0
0.3
0.4
0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
0.3
-0.4
1.1
0.5
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.3
0.3
0.4
0.6
auxotrophy
YNB Glucose
0.3
0.0
0.3
0.7
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
0.6
0.3
0.5
0.4
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.1
0.5
0.8
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.7
0.3
0.1
0.8
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