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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4981: 13349 - KOG2117 Uncharacterized conserved protein, at 1469981 to 1471275
13349
mRNA_4982: 13350 - K17879 NUDT7 peroxisomal coenzyme A diphosphatase NUDT7, at 1471731 to 1473077
13350
mRNA_4983: 13351 - SUPERFAMILY--SSF48371, at 1473284 to 1476238
13351
mRNA_4984: 13352 - HMMPfam-OsmC-like protein-PF02566,SUPERFAMILY--SSF82784, at 1476412 to 1477119
13352
mRNA_4985: 13353 - BLAST vps9 domain protein [Zymoseptoria brevis], at 1477424 to 1478250
13353
Group
Condition
mRNA_4981
mRNA_4982
mRNA_4983
mRNA_4984
mRNA_4985
13349
13350
13351
13352
13353
auxotrophy
Dropout Complete
-0.1
-0.8
-0.4
-1.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-1.9
-0.4
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-1.8
0.0
0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.8
-0.4
-0.4
growth on oleic acid
YNB Oleic Acid
0.1
-0.2
-0.5
-0.7
growth on ricinoleic acid
YNB Glucose
-0.1
-1.1
-0.0
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.8
-0.4
0.5
auxotrophy
YNB Glucose 75mM Methionine
0.1
-1.0
-0.1
0.1
growth on oleic acid
YNB Glucose
-0.1
-0.1
-0.2
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.4
0.5
-0.6
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.8
-0.3
0.9
auxotrophy
YNB Glucose
-0.1
-0.9
0.0
0.5
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.2
-0.2
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.3
-0.0
0.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.1
0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
0.2
0.3
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.1
0.0
0.4
ypd buoyancy
40 hrs High Buoyancy
0.1
0.3
-0.1
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.7
-0.4
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
0.4
-0.3
0.6
growth on ypd
YPD
0.1
0.3
0.2
1.0
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