Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4979: 13347 - K03575 mutY A/G-specific adenine glycosylase, at 1466290 to 1468594 13347 mRNA_4980: 13348 - K07432 ALG13 beta-1,4-N-acetylglucosaminyltransferase, at 1469023 to 1469757 13348 mRNA_4981: 13349 - KOG2117 Uncharacterized conserved protein, at 1469981 to 1471275 13349 mRNA_4982: 13350 - K17879 NUDT7 peroxisomal coenzyme A diphosphatase NUDT7, at 1471731 to 1473077 13350 mRNA_4983: 13351 - SUPERFAMILY--SSF48371, at 1473284 to 1476238 13351
Group Condition mRNA_4979 mRNA_4980 mRNA_4981 mRNA_4982 mRNA_4983
13347
13348
13349
13350
13351
growth on ricinoleic acid YNB Ricinoleic Acid -0.0     -0.1 -1.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1     0.3 -1.9
growth on ricinoleic acid YNB Glucose -0.0     -0.1 -1.1
auxotrophy YNB Glucose 75mM Arginine -0.3     -0.2 -0.8
auxotrophy YNB Glucose -0.2     -0.1 -0.9
auxotrophy YNB Glucose 75mM Methionine -0.3     0.1 -1.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.0     -0.2 -0.8
auxotrophy Dropout Complete -0.1     -0.1 -0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0     0.2 -0.8
ypd buoyancy 40 hrs Low Buoyancy -0.1     -0.1 -0.3
growth on oleic acid YNB Oleic Acid -0.3     0.1 -0.2
growth on oleic acid YNB Glucose -0.1     -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2     0.1 -0.1
growth on ypd YPD -0.5     0.1 0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.9     0.4 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0     -0.1 0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1     0.3 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0     0.2 0.2
ypd buoyancy 40 hrs High Buoyancy 0.0     0.1 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3     0.0 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1     0.1 0.7
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