Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4978: 13346 - K12883 NCBP2, CBP20 nuclear cap-binding protein subunit 2, at 1465278 to 1466176 13346 mRNA_4979: 13347 - K03575 mutY A/G-specific adenine glycosylase, at 1466290 to 1468594 13347 mRNA_4980: 13348 - K07432 ALG13 beta-1,4-N-acetylglucosaminyltransferase, at 1469023 to 1469757 13348 mRNA_4981: 13349 - KOG2117 Uncharacterized conserved protein, at 1469981 to 1471275 13349 mRNA_4982: 13350 - K17879 NUDT7 peroxisomal coenzyme A diphosphatase NUDT7, at 1471731 to 1473077 13350
Group Condition mRNA_4978 mRNA_4979 mRNA_4980 mRNA_4981 mRNA_4982
13346
13347
13348
13349
13350
growth on ricinoleic acid YNB Ricinoleic Acid -1.4 -0.0     -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.9     0.4
facs on lipid accumulation Sorted Low BODIPY Gate -1.3 0.0     -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.6 -0.1     -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.7 -0.2     0.1
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.3     -0.2
ypd buoyancy 40 hrs High Buoyancy -0.8 0.0     0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.0     -0.1
growth on oleic acid YNB Oleic Acid -0.2 -0.3     0.1
auxotrophy Dropout Complete -0.2 -0.1     -0.1
growth on ypd YPD 0.0 -0.5     0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.1     0.3
auxotrophy YNB Glucose 0.0 -0.2     -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 0.0     0.2
growth on ricinoleic acid YNB Glucose 0.0 -0.0     -0.1
growth on oleic acid YNB Glucose 0.1 -0.1     -0.1
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.3     0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.1     0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0     0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 -0.1     0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.2 0.3     0.0
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