Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4964: 13332 - K08334 BECN1, VPS30, ATG6 beclin 1, at 1419421 to 1420996 13332 mRNA_4965: 13333 - K15156 MED14, RGR1 mediator of RNA polymerase II transcription subunit 14, at 1421714 to 1425387 13333 mRNA_4966: 13334 - Hypothetical Protein, at 1425631 to 1426865 13334 mRNA_4967: 13335 - K11593 ELF2C, AGO eukaryotic translation initiation factor 2C, at 1427740 to 1431350 13335 mRNA_4968: 13336 - KOG4464 Signaling protein RIC-8/synembryn (regulates neurotransmitter secretion), at 1432474 to 1435003 13336
Group Condition mRNA_4964 mRNA_4965 mRNA_4966 mRNA_4967 mRNA_4968
13332
13333
13334
13335
13336
ypd buoyancy 40 hrs No Buoyancy Separation -1.1 -0.2 -0.7 0.2 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.3 -0.6 0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.8 -0.3 -0.0 0.1 0.4
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.1 -0.6 0.2 0.5
auxotrophy YNB Glucose 75mM Methionine 0.3 -0.6 -0.5 0.0 0.9
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.1 0.6 0.1 -0.1
growth on oleic acid YNB Oleic Acid 1.0 -0.6 0.0 -0.2 0.8
auxotrophy YNB Glucose 75mM Arginine 0.4 0.2 -0.5 0.0 1.1
growth on ricinoleic acid YNB Glucose 0.1 0.5 -0.2 -0.0 1.2
ypd buoyancy 40 hrs High Buoyancy 0.2 0.4 0.7 0.2 0.0
auxotrophy YNB Glucose 0.2 0.1 0.2 0.1 1.3
auxotrophy Dropout Complete 0.4 0.7 -0.4 0.2 1.2
growth on ypd YPD 0.7 0.2 1.0 -0.1 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.1 0.3 0.1 1.7
facs on lipid accumulation Sorted High BODIPY Gate -0.3 0.0 0.9 0.5 1.3
growth on oleic acid YNB Glucose 0.2 0.2 0.5 0.1 1.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.6 0.4 0.2 1.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 0.6 3.1 -0.0 -0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.2 3.0 0.1 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.5 3.6 0.1 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6 0.9 2.7 0.1 0.4
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