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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4963: 13331 - Hypothetical Protein, at 1417369 to 1418489
13331
mRNA_4964: 13332 - K08334 BECN1, VPS30, ATG6 beclin 1, at 1419421 to 1420996
13332
mRNA_4965: 13333 - K15156 MED14, RGR1 mediator of RNA polymerase II transcription subunit 14, at 1421714 to 1425387
13333
mRNA_4966: 13334 - Hypothetical Protein, at 1425631 to 1426865
13334
mRNA_4967: 13335 - K11593 ELF2C, AGO eukaryotic translation initiation factor 2C, at 1427740 to 1431350
13335
Group
Condition
mRNA_4963
mRNA_4964
mRNA_4965
mRNA_4966
mRNA_4967
13331
13332
13333
13334
13335
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
-1.1
-0.2
-0.7
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.0
-0.5
-0.1
-0.6
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.0
0.3
-0.6
-0.5
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.8
-0.3
-0.0
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-0.3
-0.3
-0.6
0.2
growth on oleic acid
YNB Oleic Acid
-0.2
1.0
-0.6
0.0
-0.2
growth on ricinoleic acid
YNB Glucose
0.1
0.1
0.5
-0.2
-0.0
auxotrophy
YNB Glucose 75mM Arginine
0.4
0.4
0.2
-0.5
0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.1
0.1
0.6
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.2
-0.1
0.3
0.1
growth on oleic acid
YNB Glucose
-0.0
0.2
0.2
0.5
0.1
auxotrophy
Dropout Complete
0.2
0.4
0.7
-0.4
0.2
auxotrophy
YNB Glucose
0.3
0.2
0.1
0.2
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
-0.3
0.0
0.9
0.5
growth on ypd
YPD
-0.5
0.7
0.2
1.0
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.0
0.2
0.4
0.7
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.5
-0.1
0.6
0.4
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.1
0.2
3.0
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
-0.3
0.5
3.6
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.4
0.6
3.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.6
0.9
2.7
0.1
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