Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4960: 13328 - K00102 dld, LDHD D-lactate dehydrogenase (cytochrome), at 1410723 to 1413349 13328 mRNA_4961: 13329 - Hypothetical Protein, at 1413701 to 1414806 13329 mRNA_4962: 13330 - Hypothetical Protein, at 1416081 to 1416742 13330 mRNA_4963: 13331 - Hypothetical Protein, at 1417369 to 1418489 13331 mRNA_4964: 13332 - K08334 BECN1, VPS30, ATG6 beclin 1, at 1419421 to 1420996 13332
Group Condition mRNA_4960 mRNA_4961 mRNA_4962 mRNA_4963 mRNA_4964
13328
13329
13330
13331
13332
facs on lipid accumulation Sorted High BODIPY Gate 0.0 -3.4 -0.4 0.0 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 -4.0 -0.1 0.3 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -2.4 0.5 0.2 0.1
growth on ypd YPD 0.0 -2.5 0.8 -0.5 0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -2.5 0.2 0.1 0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 -2.1 0.5 0.2 0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -0.2 -0.5 0.2 -0.8
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 1.4 -0.2 -0.8 -1.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -1.2 0.6 0.3 -0.3
auxotrophy Dropout Complete 0.3 -0.3 0.1 0.2 0.4
ypd buoyancy 40 hrs Low Buoyancy 0.1 1.6 -0.4 0.0 -0.5
growth on oleic acid YNB Glucose 0.2 0.3 0.2 -0.0 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.1 1.3 -0.2 -0.1 0.1
ypd buoyancy 40 hrs High Buoyancy 0.0 1.7 -0.4 0.0 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.6 0.3 0.3 0.2
auxotrophy YNB Glucose 75mM Methionine 0.3 0.8 0.3 0.0 0.3
auxotrophy YNB Glucose 0.3 0.7 0.4 0.3 0.2
growth on ricinoleic acid YNB Glucose 0.2 1.4 0.4 0.1 0.1
auxotrophy YNB Glucose 75mM Arginine 0.3 1.2 0.3 0.4 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 1.7 0.3 0.5 -0.1
growth on oleic acid YNB Oleic Acid 0.1 1.2 0.7 -0.2 1.0
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