Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4952: 13320 - BLAST Tetratricopeptide-like helical [Xanthophyllomyces den..., at 1387683 to 1389449 13320 mRNA_4953: 13321 - HMMPfam-Pyridoxamine 5'-phosphate oxidase-PF01243,SUPERFAMILY--SSF50475, at 1389640 to 1390956 13321 mRNA_4954: 13322 - Hypothetical Protein, at 1391510 to 1392423 13322 mRNA_4955: 13323 - K20306 TRAPPC9, TRS120 trafficking protein particle complex subunit 9, at 1393172 to 1398147 13323 mRNA_4956: 13324 - HMMPfam-SMI1 / KNR4 family (SUKH-1)-PF09346, at 1398453 to 1400732 13324
Group Condition mRNA_4952 mRNA_4953 mRNA_4954 mRNA_4955 mRNA_4956
13320
13321
13322
13323
13324
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 0.3 -0.2 -0.3 -0.3
auxotrophy YNB Glucose 75mM Methionine 0.4 -0.3 -0.1 -0.6 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.2 -0.1 0.0 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.1 -0.0 -0.2 -1.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.0 -0.1 -0.7 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 -0.1 -0.0 -0.2 -0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 -0.0 -0.1 -0.6 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.1 0.0 0.1 -0.8 0.2
auxotrophy YNB Glucose 0.2 -0.4 0.1 0.3 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 -0.3 0.8 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.0 -0.0 0.2 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.2 0.0 0.1 -0.1
growth on ypd YPD -0.0 -0.0 -0.3 0.2 0.2
auxotrophy YNB Glucose 75mM Arginine 0.5 -0.4 -0.1 0.4 -0.4
growth on oleic acid YNB Glucose 0.1 -0.3 0.0 0.4 0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.2 -0.0 1.7 -0.9
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.2 0.0 0.4 -0.5
growth on ricinoleic acid YNB Glucose -0.2 -0.2 0.0 1.2 -0.3
auxotrophy Dropout Complete -0.0 -0.3 -0.0 1.3 -0.3
growth on oleic acid YNB Oleic Acid -0.0 -0.1 -0.0 1.1 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.1 0.0 2.7 -0.9
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