Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4951: 13319 - K15114 ORT1 mitochondrial ornithine carrier protein, at 1386177 to 1387405 13319 mRNA_4952: 13320 - BLAST Tetratricopeptide-like helical [Xanthophyllomyces den..., at 1387683 to 1389449 13320 mRNA_4953: 13321 - HMMPfam-Pyridoxamine 5'-phosphate oxidase-PF01243,SUPERFAMILY--SSF50475, at 1389640 to 1390956 13321 mRNA_4954: 13322 - Hypothetical Protein, at 1391510 to 1392423 13322 mRNA_4955: 13323 - K20306 TRAPPC9, TRS120 trafficking protein particle complex subunit 9, at 1393172 to 1398147 13323
Group Condition mRNA_4951 mRNA_4952 mRNA_4953 mRNA_4954 mRNA_4955
13319
13320
13321
13322
13323
auxotrophy YNB Glucose 75mM Methionine -0.9 0.4 -0.3 -0.1 -0.6
auxotrophy YNB Glucose -1.6 0.2 -0.4 0.1 0.3
growth on oleic acid YNB Glucose -0.9 0.1 -0.3 0.0 0.4
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 -0.8 0.3 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 0.3 0.1 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 0.0 -0.0 -0.0 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.3 -0.0 0.0 -0.1 -0.7
ypd buoyancy 40 hrs High Buoyancy 0.3 0.1 0.0 0.1 -0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 0.5 -0.1 -0.0 -0.2
growth on ypd YPD -0.2 -0.0 -0.0 -0.3 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.1 -0.2 0.0 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 0.3 -0.0 -0.1 -0.6
growth on ricinoleic acid YNB Glucose -0.9 -0.2 -0.2 0.0 1.2
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.0 -0.2 -0.1 0.0
auxotrophy YNB Glucose 75mM Arginine -0.3 0.5 -0.4 -0.1 0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.2 -0.1 -0.3 0.8
auxotrophy Dropout Complete -0.5 -0.0 -0.3 -0.0 1.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.3 0.2 0.0 0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.1 -0.2 -0.0 1.7
growth on oleic acid YNB Oleic Acid 0.4 -0.0 -0.1 -0.0 1.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 0.1 -0.1 0.0 2.7
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