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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4941: 13309 - K12608 CAF16 CCR4-NOT complex subunit CAF16, at 1368414 to 1369977
13309
mRNA_4942: 13310 - Hypothetical Protein, at 1370208 to 1371359
13310
mRNA_4943: 13311 - K13095 SF1 splicing factor 1, at 1372018 to 1374079
13311
mRNA_4944: 13312 - KOG1375 Beta tubulin, at 1374400 to 1376265
13312
mRNA_4945: 13313 - Hypothetical Protein, at 1376497 to 1378672
13313
Group
Condition
mRNA_4941
mRNA_4942
mRNA_4943
mRNA_4944
mRNA_4945
13309
13310
13311
13312
13313
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.6
-1.4
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.4
-0.3
-0.3
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.3
-0.2
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.2
-0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.2
-0.2
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
0.2
-0.6
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
0.3
-0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.2
-0.6
0.5
growth on ricinoleic acid
YNB Glucose
0.2
-0.3
-0.3
0.0
growth on ypd
YPD
0.2
-0.1
-0.2
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.3
-0.3
0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
-0.1
-0.1
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.2
-0.0
-0.1
auxotrophy
Dropout Complete
0.2
0.1
0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
0.3
0.0
0.4
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.2
0.2
-0.1
growth on oleic acid
YNB Oleic Acid
0.2
0.3
0.1
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
0.8
0.2
0.2
auxotrophy
YNB Glucose
0.5
0.4
-0.1
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.4
0.2
0.2
0.1
growth on oleic acid
YNB Glucose
0.2
0.5
0.4
0.1
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