Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4937: 13305 - HMMPfam-Single-strand binding protein family-PF00436,ProSiteProfiles-Single-strand binding (SSB) domain profile.-PS50935,SUPERFAMILY--SSF50249, at 1362763 to 1363546 13305 mRNA_4938: 13306 - HMMPfam-Protein of unknown function (DUF1749)-PF08538,SUPERFAMILY--SSF53474, at 1364242 to 1365196 13306 mRNA_4939: 13307 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 1365348 to 1366647 13307 mRNA_4940: 13308 - K06693 PSMD9 26S proteasome non-ATPase regulatory subunit 9, at 1367349 to 1367987 13308 mRNA_4941: 13309 - K12608 CAF16 CCR4-NOT complex subunit CAF16, at 1368414 to 1369977 13309
Group Condition mRNA_4937 mRNA_4938 mRNA_4939 mRNA_4940 mRNA_4941
13305
13306
13307
13308
13309
ypd buoyancy 40 hrs No Buoyancy Separation   -0.2 0.3 -0.4 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate   0.2 -0.3 -0.3 -0.4
growth on ypd YPD   -0.4 -0.6 0.3 0.2
facs on lipid accumulation Sorted High BODIPY Gate   0.3 -0.2 -0.3 -0.1
growth on ricinoleic acid YNB Glucose   0.1 -0.3 -0.3 0.2
growth on oleic acid YNB Glucose   0.2 -0.3 -0.3 0.2
growth on oleic acid YNB Oleic Acid   -0.0 -0.1 -0.0 0.2
facs on lipid accumulation Sorted No BODIPY Gate   0.3 -0.0 0.3 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.2 0.0 0.2 0.2
auxotrophy YNB Glucose 75mM Arginine   -0.3 0.1 0.1 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.7 -0.0 -0.6 0.2
ypd buoyancy 40 hrs High Buoyancy   0.1 0.3 0.3 -0.4
ypd buoyancy 40 hrs Low Buoyancy   0.2 0.4 0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.8 0.1 0.0 -0.4
ypd buoyancy 40 hrs Median Buoyancy   0.0 0.3 0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine   -0.3 -0.0 0.6 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy   1.0 -0.1 0.2 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid   0.4 0.2 -0.1 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.7 0.1 0.1 0.1
auxotrophy YNB Glucose   0.2 -0.0 0.4 0.5
auxotrophy Dropout Complete   0.3 0.2 0.5 0.2
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