Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4935: 13303 - BLAST salivary gland secretion 1 [Moniliophthora roreri..., at 1356416 to 1359547 13303 mRNA_4936: 13304 - HMMPfam-MFS_1 like family-PF12832, at 1359714 to 1362398 13304 mRNA_4937: 13305 - HMMPfam-Single-strand binding protein family-PF00436,ProSiteProfiles-Single-strand binding (SSB) domain profile.-PS50935,SUPERFAMILY--SSF50249, at 1362763 to 1363546 13305 mRNA_4938: 13306 - HMMPfam-Protein of unknown function (DUF1749)-PF08538,SUPERFAMILY--SSF53474, at 1364242 to 1365196 13306 mRNA_4939: 13307 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 1365348 to 1366647 13307
Group Condition mRNA_4935 mRNA_4936 mRNA_4937 mRNA_4938 mRNA_4939
13303
13304
13305
13306
13307
growth on ypd YPD -0.0 0.4   -0.4 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.3   -0.2 0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 0.1   -0.3 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.3   -0.2 0.0
growth on ricinoleic acid YNB Glucose 0.0 -0.2   0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -0.2   0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.2 0.3   -0.3 -0.0
growth on oleic acid YNB Oleic Acid -0.0 0.1   -0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2   0.0 0.3
auxotrophy YNB Glucose -0.2 0.0   0.2 -0.0
growth on oleic acid YNB Glucose -0.2 0.3   0.2 -0.3
auxotrophy Dropout Complete -0.2 -0.0   0.3 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.2   0.2 0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.1   0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.1   0.1 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.0   0.7 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.0   0.7 -0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.3   0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.0   0.4 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0   0.8 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.1   1.0 -0.1
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