Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4929: 13297 - K01956 carA, CPA1 carbamoyl-phosphate synthase small subunit, at 1340791 to 1342395 13297 mRNA_4930: 13298 - HMMPfam-Ubiquitin family-PF00240,HMMPfam-BAG domain-PF02179,ProSiteProfiles-Ubiquitin domain profile.-PS50053,ProSiteProfiles-BAG domain profile.-PS51035,SMART-BAG domains, present in regulator of Hsp70 proteins-SM00264,SUPERFAMILY--SSF54236,SUPERFAMILY--SSF63491, at 1342722 to 1344500 13298 mRNA_4931: 13299 - ProSiteProfiles-BTB domain profile.-PS50097, at 1344834 to 1346285 13299 mRNA_4932: 13300 - K11547 NDC80, HEC1, TID3 kinetochore protein NDC80, at 1346785 to 1349520 13300 mRNA_4933: 13301 - K14972 PAXIP1, PTIP PAX-interacting protein 1, at 1349859 to 1354237 13301
Group Condition mRNA_4929 mRNA_4930 mRNA_4931 mRNA_4932 mRNA_4933
13297
13298
13299
13300
13301
facs on lipid accumulation Sorted High BODIPY Gate -2.8 -0.8 -0.4   -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -3.4 -0.6 -0.0   -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -3.3 -0.4 -0.2   -0.1
auxotrophy YNB Glucose 75mM Methionine -4.2 -0.1 0.3   0.0
auxotrophy YNB Glucose -3.8 -0.4 0.3   0.1
facs on lipid accumulation Sorted No BODIPY Gate -3.2 -0.4 0.0   -0.2
growth on oleic acid YNB Glucose -4.4 0.5 0.3   0.0
growth on oleic acid YNB Oleic Acid -3.5 -0.0 0.0   -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -3.8 0.2 0.5   -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -3.9 0.6 0.1   -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -2.6 -0.3 -0.1   -0.2
growth on ricinoleic acid YNB Glucose -3.1 0.2 0.1   0.0
facs on lipid accumulation Sorted Low BODIPY Gate -2.4 -0.3 -0.1   0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -2.2 0.1 -0.1   0.1
ypd buoyancy 40 hrs No Buoyancy Separation -1.4 -0.1 -0.5   0.0
auxotrophy Dropout Complete -0.6 -0.2 0.2   0.2
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.3 0.1   -0.2
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.4 0.3   0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 0.1 0.3   -0.0
ypd buoyancy 40 hrs High Buoyancy 0.0 0.1 0.2   -0.1
growth on ypd YPD 0.2 0.2 0.4   -0.1
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