Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4927: 13295 - HMMPfam-Beta-lactamase-PF00144,SUPERFAMILY--SSF56601, at 1334760 to 1336928 13295 mRNA_4928: 13296 - HMMPfam-Transient receptor potential (TRP) ion channel-PF06011,HMMPfam-ML-like domain-PF14558, at 1337111 to 1340226 13296 mRNA_4929: 13297 - K01956 carA, CPA1 carbamoyl-phosphate synthase small subunit, at 1340791 to 1342395 13297 mRNA_4930: 13298 - HMMPfam-Ubiquitin family-PF00240,HMMPfam-BAG domain-PF02179,ProSiteProfiles-Ubiquitin domain profile.-PS50053,ProSiteProfiles-BAG domain profile.-PS51035,SMART-BAG domains, present in regulator of Hsp70 proteins-SM00264,SUPERFAMILY--SSF54236,SUPERFAMILY--SSF63491, at 1342722 to 1344500 13298 mRNA_4931: 13299 - ProSiteProfiles-BTB domain profile.-PS50097, at 1344834 to 1346285 13299
Group Condition mRNA_4927 mRNA_4928 mRNA_4929 mRNA_4930 mRNA_4931
13295
13296
13297
13298
13299
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.2 -0.1 -3.4 -0.6 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.0 -3.3 -0.4 -0.2
growth on oleic acid YNB Glucose -0.6 -0.3 -4.4 0.5 0.3
growth on oleic acid YNB Oleic Acid -0.6 -0.3 -3.5 -0.0 0.0
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.6 -4.2 -0.1 0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.4 -2.8 -0.8 -0.4
auxotrophy YNB Glucose 0.4 -0.7 -3.8 -0.4 0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.5 -3.9 0.6 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -0.5 -3.2 -0.4 0.0
growth on ricinoleic acid YNB Glucose -0.2 -0.5 -3.1 0.2 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2 -3.8 0.2 0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 0.3 -2.6 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.9 0.4 -2.2 0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 -0.1 -2.4 -0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 0.3 -1.4 -0.1 -0.5
auxotrophy Dropout Complete 0.4 -1.0 -0.6 -0.2 0.2
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.5 0.2 -0.4 0.3
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.1 0.2 -0.3 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.1 -0.2 0.1 0.3
ypd buoyancy 40 hrs High Buoyancy 0.1 0.0 0.0 0.1 0.2
growth on ypd YPD 0.6 -0.2 0.2 0.2 0.4
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