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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4923: 13291 - K03141 TFIIH1, GTF2H1, TFB1 transcription initiation factor TFIIH subunit 1, at 1320698 to 1323090
13291
mRNA_4924: 13292 - KOG3012 Uncharacterized conserved protein, at 1323215 to 1324561
13292
mRNA_4925: 13293 - ProSiteProfiles-WW/rsp5/WWP domain profile.-PS50020,SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045, at 1324848 to 1328229
13293
mRNA_4926: 13294 - ProSiteProfiles-Chromo and chromo shadow domain profile.-PS50013, at 1328317 to 1334558
13294
mRNA_4927: 13295 - HMMPfam-Beta-lactamase-PF00144,SUPERFAMILY--SSF56601, at 1334760 to 1336928
13295
Group
Condition
mRNA_4923
mRNA_4924
mRNA_4925
mRNA_4926
mRNA_4927
13291
13292
13293
13294
13295
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
-0.7
0.1
-0.5
growth on oleic acid
YNB Oleic Acid
-0.4
-0.3
0.1
-0.6
growth on ricinoleic acid
YNB Glucose
-0.6
-0.5
0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
-0.4
0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.7
-0.1
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.9
0.2
0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
1.0
0.1
-1.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
-0.5
0.6
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.2
-0.3
0.2
growth on oleic acid
YNB Glucose
0.1
0.2
0.0
-0.6
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.2
-0.2
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
-1.1
0.1
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
1.0
-0.2
-0.9
growth on ypd
YPD
-0.3
-0.5
0.2
0.6
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
0.5
0.0
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.4
0.5
0.1
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.3
0.5
0.3
0.0
auxotrophy
YNB Glucose
-0.2
0.4
0.2
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
1.3
-0.1
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
1.3
-0.0
-0.6
auxotrophy
Dropout Complete
-0.1
0.6
0.1
0.4
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