Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4923: 13291 - K03141 TFIIH1, GTF2H1, TFB1 transcription initiation factor TFIIH subunit 1, at 1320698 to 1323090 13291 mRNA_4924: 13292 - KOG3012 Uncharacterized conserved protein, at 1323215 to 1324561 13292 mRNA_4925: 13293 - ProSiteProfiles-WW/rsp5/WWP domain profile.-PS50020,SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045, at 1324848 to 1328229 13293 mRNA_4926: 13294 - ProSiteProfiles-Chromo and chromo shadow domain profile.-PS50013, at 1328317 to 1334558 13294 mRNA_4927: 13295 - HMMPfam-Beta-lactamase-PF00144,SUPERFAMILY--SSF56601, at 1334760 to 1336928 13295
Group Condition mRNA_4923 mRNA_4924 mRNA_4925 mRNA_4926 mRNA_4927
13291
13292
13293
13294
13295
growth on ricinoleic acid YNB Ricinoleic Acid   -0.6 -0.7 0.1 -0.5
growth on oleic acid YNB Oleic Acid   -0.4 -0.3 0.1 -0.6
growth on ricinoleic acid YNB Glucose   -0.6 -0.5 0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.6 -0.4 0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy   -0.1 -0.7 -0.1 0.1
facs on lipid accumulation Sorted No BODIPY Gate   -0.3 -0.9 0.2 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.4 1.0 0.1 -1.2
facs on lipid accumulation Sorted High BODIPY Gate   -0.6 -0.5 0.6 0.2
ypd buoyancy 40 hrs Median Buoyancy   0.0 -0.2 -0.3 0.2
growth on oleic acid YNB Glucose   0.1 0.2 0.0 -0.6
ypd buoyancy 40 hrs High Buoyancy   -0.1 -0.2 -0.2 0.1
facs on lipid accumulation Sorted Low BODIPY Gate   0.4 -1.1 0.1 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.0 1.0 -0.2 -0.9
growth on ypd YPD   -0.3 -0.5 0.2 0.6
ypd buoyancy 40 hrs No Buoyancy Separation   -0.3 0.5 0.0 -0.0
auxotrophy YNB Glucose 75mM Methionine   -0.4 0.5 0.1 0.2
auxotrophy YNB Glucose 75mM Arginine   -0.3 0.5 0.3 0.0
auxotrophy YNB Glucose   -0.2 0.4 0.2 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.2 1.3 -0.1 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.3 1.3 -0.0 -0.6
auxotrophy Dropout Complete   -0.1 0.6 0.1 0.4
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