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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4921: 13289 - K12156 CYP83A1 cytochrome P450, family 83, subfamily A, polypeptide 1, at 1313385 to 1315387
13289
mRNA_4922: 13290 - K18670 YAK1 dual specificity protein kinase YAK1, at 1315814 to 1320351
13290
mRNA_4923: 13291 - K03141 TFIIH1, GTF2H1, TFB1 transcription initiation factor TFIIH subunit 1, at 1320698 to 1323090
13291
mRNA_4924: 13292 - KOG3012 Uncharacterized conserved protein, at 1323215 to 1324561
13292
mRNA_4925: 13293 - ProSiteProfiles-WW/rsp5/WWP domain profile.-PS50020,SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045, at 1324848 to 1328229
13293
Group
Condition
mRNA_4921
mRNA_4922
mRNA_4923
mRNA_4924
mRNA_4925
13289
13290
13291
13292
13293
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
-1.7
-0.6
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-0.8
0.4
-1.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.2
-0.3
-0.9
growth on ricinoleic acid
YNB Ricinoleic Acid
0.5
-0.4
-0.6
-0.7
growth on ricinoleic acid
YNB Glucose
0.0
0.1
-0.6
-0.5
growth on oleic acid
YNB Oleic Acid
0.2
-0.3
-0.4
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
0.2
-0.6
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.5
-0.1
-0.7
growth on ypd
YPD
0.4
-0.0
-0.3
-0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.1
0.0
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.0
-0.1
-0.4
0.5
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
-0.3
-0.3
0.5
ypd buoyancy
40 hrs High Buoyancy
0.3
0.0
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.1
-0.3
0.5
auxotrophy
YNB Glucose
0.2
-0.1
-0.2
0.4
growth on oleic acid
YNB Glucose
0.4
-0.1
0.1
0.2
auxotrophy
Dropout Complete
0.2
0.1
-0.1
0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.2
-0.4
1.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.3
0.3
1.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.7
0.9
-0.0
1.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.2
0.2
1.3
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