Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4921: 13289 - K12156 CYP83A1 cytochrome P450, family 83, subfamily A, polypeptide 1, at 1313385 to 1315387 13289 mRNA_4922: 13290 - K18670 YAK1 dual specificity protein kinase YAK1, at 1315814 to 1320351 13290 mRNA_4923: 13291 - K03141 TFIIH1, GTF2H1, TFB1 transcription initiation factor TFIIH subunit 1, at 1320698 to 1323090 13291 mRNA_4924: 13292 - KOG3012 Uncharacterized conserved protein, at 1323215 to 1324561 13292 mRNA_4925: 13293 - ProSiteProfiles-WW/rsp5/WWP domain profile.-PS50020,SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045, at 1324848 to 1328229 13293
Group Condition mRNA_4921 mRNA_4922 mRNA_4923 mRNA_4924 mRNA_4925
13289
13290
13291
13292
13293
facs on lipid accumulation Sorted High BODIPY Gate 0.4 -1.7   -0.6 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.8   0.4 -1.1
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.2   -0.3 -0.9
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 -0.4   -0.6 -0.7
growth on ricinoleic acid YNB Glucose 0.0 0.1   -0.6 -0.5
growth on oleic acid YNB Oleic Acid 0.2 -0.3   -0.4 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.2   -0.6 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.5   -0.1 -0.7
growth on ypd YPD 0.4 -0.0   -0.3 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.1   0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.1   -0.4 0.5
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 -0.3   -0.3 0.5
ypd buoyancy 40 hrs High Buoyancy 0.3 0.0   -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.1   -0.3 0.5
auxotrophy YNB Glucose 0.2 -0.1   -0.2 0.4
growth on oleic acid YNB Glucose 0.4 -0.1   0.1 0.2
auxotrophy Dropout Complete 0.2 0.1   -0.1 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.2   -0.4 1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.3   0.3 1.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 0.9   -0.0 1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.2   0.2 1.3
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