Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4920: 13288 - K01807 rpiA ribose 5-phosphate isomerase A, at 1311441 to 1312877 13288 mRNA_4921: 13289 - K12156 CYP83A1 cytochrome P450, family 83, subfamily A, polypeptide 1, at 1313385 to 1315387 13289 mRNA_4922: 13290 - K18670 YAK1 dual specificity protein kinase YAK1, at 1315814 to 1320351 13290 mRNA_4923: 13291 - K03141 TFIIH1, GTF2H1, TFB1 transcription initiation factor TFIIH subunit 1, at 1320698 to 1323090 13291 mRNA_4924: 13292 - KOG3012 Uncharacterized conserved protein, at 1323215 to 1324561 13292
Group Condition mRNA_4920 mRNA_4921 mRNA_4922 mRNA_4923 mRNA_4924
13288
13289
13290
13291
13292
facs on lipid accumulation Sorted High BODIPY Gate   0.4 -1.7   -0.6
growth on ricinoleic acid YNB Ricinoleic Acid   0.5 -0.4   -0.6
auxotrophy YNB Glucose 75mM Methionine   0.0 -0.1   -0.4
growth on oleic acid YNB Oleic Acid   0.2 -0.3   -0.4
ypd buoyancy 40 hrs No Buoyancy Separation   0.0 -0.3   -0.3
growth on ricinoleic acid YNB Glucose   0.0 0.1   -0.6
facs on lipid accumulation Sorted No BODIPY Gate   0.0 -0.2   -0.3
auxotrophy YNB Glucose 75mM Arginine   -0.0 -0.1   -0.3
facs on lipid accumulation Sorted Low BODIPY Gate   0.2 -0.8   0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.2 -0.3   0.3
growth on ricinoleic acid YNB Methylricinoleic Acid   0.2 0.2   -0.6
auxotrophy YNB Glucose   0.2 -0.1   -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.1 0.2   -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.0 -0.2   0.2
ypd buoyancy 40 hrs Median Buoyancy   -0.0 0.1   0.0
growth on ypd YPD   0.4 -0.0   -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.7 0.9   -0.0
auxotrophy Dropout Complete   0.2 0.1   -0.1
ypd buoyancy 40 hrs Low Buoyancy   -0.2 0.5   -0.1
ypd buoyancy 40 hrs High Buoyancy   0.3 0.0   -0.1
growth on oleic acid YNB Glucose   0.4 -0.1   0.1
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