Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4919: 13287 - K01768 E4.6.1.1 adenylate cyclase, at 1304232 to 1310691 13287 mRNA_4920: 13288 - K01807 rpiA ribose 5-phosphate isomerase A, at 1311441 to 1312877 13288 mRNA_4921: 13289 - K12156 CYP83A1 cytochrome P450, family 83, subfamily A, polypeptide 1, at 1313385 to 1315387 13289 mRNA_4922: 13290 - K18670 YAK1 dual specificity protein kinase YAK1, at 1315814 to 1320351 13290 mRNA_4923: 13291 - K03141 TFIIH1, GTF2H1, TFB1 transcription initiation factor TFIIH subunit 1, at 1320698 to 1323090 13291
Group Condition mRNA_4919 mRNA_4920 mRNA_4921 mRNA_4922 mRNA_4923
13287
13288
13289
13290
13291
facs on lipid accumulation Sorted High BODIPY Gate 0.3   0.4 -1.7  
ypd buoyancy 40 hrs No Buoyancy Separation -0.5   0.0 -0.3  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4   -0.7 0.9  
facs on lipid accumulation Sorted Low BODIPY Gate 0.4   0.2 -0.8  
facs on lipid accumulation Sorted No BODIPY Gate 0.1   0.0 -0.2  
ypd buoyancy 40 hrs Median Buoyancy -0.2   -0.0 0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6   -0.2 -0.3  
ypd buoyancy 40 hrs High Buoyancy -0.3   0.3 0.0  
ypd buoyancy 40 hrs Low Buoyancy 0.1   -0.2 0.5  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.7   -0.0 -0.2  
growth on ypd YPD 0.1   0.4 -0.0  
auxotrophy YNB Glucose 75mM Methionine 0.7   0.0 -0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3   0.1 0.2  
growth on oleic acid YNB Oleic Acid 0.7   0.2 -0.3  
auxotrophy YNB Glucose 75mM Arginine 0.8   -0.0 -0.1  
growth on oleic acid YNB Glucose 0.4   0.4 -0.1  
auxotrophy YNB Glucose 0.7   0.2 -0.1  
growth on ricinoleic acid YNB Glucose 0.7   0.0 0.1  
auxotrophy Dropout Complete 0.7   0.2 0.1  
growth on ricinoleic acid YNB Ricinoleic Acid 1.2   0.5 -0.4  
growth on ricinoleic acid YNB Methylricinoleic Acid 1.0   0.2 0.2  
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