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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4911: 13279 - BLAST pre-mrna-splicing factor cwc22 [Moniliophthora ro..., at 1288302 to 1289594
13279
mRNA_4912: 13280 - KOG3309 Ferredoxin, at 1289654 to 1291365
13280
mRNA_4913: 13281 - HMMPfam-Spermine/spermidine synthase-PF01564,ProSiteProfiles-Polyamine biosynthesis (PABS) domain profile.-PS51006,SUPERFAMILY--SSF53335, at 1291669 to 1293879
13281
mRNA_4914: 13282 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 1294670 to 1297098
13282
mRNA_4915: 13283 - HMMPfam-Complex1_LYR-like-PF13233, at 1297667 to 1298264
13283
Group
Condition
mRNA_4911
mRNA_4912
mRNA_4913
mRNA_4914
mRNA_4915
13279
13280
13281
13282
13283
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.7
-0.5
0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.2
-0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.4
0.2
-0.0
growth on ypd
YPD
0.7
-1.0
-0.2
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.5
-1.3
0.2
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.8
-1.6
0.5
0.0
growth on ricinoleic acid
YNB Glucose
0.4
-0.3
-0.3
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.5
0.1
0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-0.0
0.2
-0.2
auxotrophy
YNB Glucose
0.0
0.4
-0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.6
-0.2
-0.2
-0.0
growth on oleic acid
YNB Oleic Acid
0.5
-0.4
0.0
0.1
ypd buoyancy
40 hrs High Buoyancy
0.0
-0.1
-0.2
0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.5
0.1
0.2
-0.4
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.6
0.1
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.4
1.1
-0.3
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.4
-0.1
0.2
0.2
growth on oleic acid
YNB Glucose
0.8
0.1
0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.9
-0.7
0.4
0.2
auxotrophy
Dropout Complete
0.1
0.7
-0.1
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.7
-0.2
0.2
0.4
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