Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4909: 13277 - KOG1339 Aspartyl protease, at 1281980 to 1284451 13277 mRNA_4910: 13278 - K14555 UTP13, TBL3 U3 small nucleolar RNA-associated protein 13, at 1284802 to 1288001 13278 mRNA_4911: 13279 - BLAST pre-mrna-splicing factor cwc22 [Moniliophthora ro..., at 1288302 to 1289594 13279 mRNA_4912: 13280 - KOG3309 Ferredoxin, at 1289654 to 1291365 13280 mRNA_4913: 13281 - HMMPfam-Spermine/spermidine synthase-PF01564,ProSiteProfiles-Polyamine biosynthesis (PABS) domain profile.-PS51006,SUPERFAMILY--SSF53335, at 1291669 to 1293879 13281
Group Condition mRNA_4909 mRNA_4910 mRNA_4911 mRNA_4912 mRNA_4913
13277
13278
13279
13280
13281
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -3.1 0.1 -0.7 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -3.6 0.1 -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -3.5 0.6 -0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -2.6 0.1 -0.0 0.2
growth on ricinoleic acid YNB Glucose 0.2 -2.3 0.4 -0.3 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -1.4 -0.1 -0.5 0.1
auxotrophy YNB Glucose 0.1 -2.3 0.0 0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -1.0 0.5 -1.3 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.7 -0.1 -0.4 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -1.8 0.5 0.1 0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -1.6 0.1 0.6 0.1
auxotrophy YNB Glucose 75mM Arginine 0.2 -1.3 -0.4 1.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -1.3 0.9 -0.7 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.4 0.8 -1.6 0.5
auxotrophy Dropout Complete 0.1 -1.2 0.1 0.7 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -0.8 0.7 -0.2 0.2
growth on ypd YPD -0.2 0.8 0.7 -1.0 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.0 0.4 0.0 -0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.1 0.2 0.5 -0.4 0.0
growth on oleic acid YNB Glucose 0.1 -0.8 0.8 0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.7 0.4 -0.1 0.2
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