Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4903: 13271 - BLAST topoisomerase i [Xanthophyllomyces dendrorhous], at 1266011 to 1266275 13271 mRNA_4904: 13272 - K00367 narB ferredoxin-nitrate reductase, at 1266419 to 1270865 13272 mRNA_4905: 13273 - KOG2371 Molybdopterin biosynthesis protein, at 1271158 to 1273410 13273 mRNA_4906: 13274 - K03540 RPR2, RPP21 ribonuclease P protein subunit RPR2, at 1273469 to 1274303 13274 mRNA_4907: 13275 - HMMPfam-Cytochrome c oxidase subunit VIIc-PF02935,SUPERFAMILY--SSF81427, at 1274592 to 1274946 13275
Group Condition mRNA_4903 mRNA_4904 mRNA_4905 mRNA_4906 mRNA_4907
13271
13272
13273
13274
13275
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.2 -0.7    
growth on ricinoleic acid YNB Ricinoleic Acid   -0.4 -0.3    
growth on ricinoleic acid YNB Glucose   -0.3 -0.3    
auxotrophy Dropout Complete   -0.3 -0.3    
facs on lipid accumulation Sorted No BODIPY Gate   -0.1 -0.4    
growth on oleic acid YNB Oleic Acid   -0.4 -0.1    
auxotrophy YNB Glucose   -0.2 -0.1    
auxotrophy YNB Glucose 75mM Methionine   -0.1 -0.2    
growth on ypd YPD   -0.1 -0.2    
growth on oleic acid YNB Glucose   -0.2 -0.1    
ypd buoyancy 40 hrs High Buoyancy   -0.0 -0.2    
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.0 -0.2    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.1 -0.0    
facs on lipid accumulation Sorted Low BODIPY Gate   -0.1 0.1    
facs on lipid accumulation Sorted High BODIPY Gate   0.1 -0.2    
ypd buoyancy 40 hrs Median Buoyancy   0.1 -0.1    
auxotrophy YNB Glucose 75mM Arginine   -0.1 0.0    
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.1 -0.1    
ypd buoyancy 40 hrs Low Buoyancy   0.1 -0.1    
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.1 0.1    
ypd buoyancy 40 hrs No Buoyancy Separation   0.5 0.2    
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