Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4897: 13265 - K01759 GLO1, gloA lactoylglutathione lyase, at 1252541 to 1253295 13265 mRNA_4898: 13266 - HMMPfam-TAP-like protein-PF08386,SUPERFAMILY--SSF53474, at 1253666 to 1256190 13266 mRNA_4899: 13267 - KOG4705 Uncharacterized conserved protein, at 1256310 to 1257849 13267 mRNA_4900: 13268 - HMMPfam-NADH-ubiquinone oxidoreductase B12 subunit family-PF08122, at 1258354 to 1258880 13268 mRNA_4901: 13269 - K03163 TOP1 DNA topoisomerase I, at 1259473 to 1262647 13269
Group Condition mRNA_4897 mRNA_4898 mRNA_4899 mRNA_4900 mRNA_4901
13265
13266
13267
13268
13269
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 0.2 -1.0    
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.2 -1.6    
growth on ypd YPD -0.4 0.3 -1.2    
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8 0.2 -0.7    
ypd buoyancy 40 hrs No Buoyancy Separation -1.8 -0.0 0.6    
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 -0.1 -0.2    
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -0.2 0.2    
auxotrophy YNB Glucose 75mM Methionine -0.3 0.2 -0.7    
facs on lipid accumulation Sorted Low BODIPY Gate -1.9 0.2 1.0    
auxotrophy YNB Glucose 0.3 0.1 -0.9    
growth on oleic acid YNB Glucose 0.0 0.2 -0.6    
auxotrophy Dropout Complete 0.4 -0.1 -0.5    
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.1 -0.2    
growth on oleic acid YNB Oleic Acid 0.1 0.2 -0.2    
growth on ricinoleic acid YNB Glucose 0.4 -0.3 0.1    
auxotrophy YNB Glucose 75mM Arginine 0.2 0.2 -0.0    
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.2 0.3    
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.0 0.1    
ypd buoyancy 40 hrs High Buoyancy 0.5 0.3 -0.1    
facs on lipid accumulation Sorted No BODIPY Gate 0.5 -0.2 0.6    
ypd buoyancy 40 hrs Median Buoyancy 0.6 0.4 0.3    
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