Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4890: 13258 - HMMPfam-SH3 domain-PF00018,HMMPfam-Cortical protein marker for cell polarity-PF12768,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044,SUPERFAMILY--SSF50965,SUPERFAMILY--SSF69322, at 1230459 to 1234781 13258 mRNA_4891: 13259 - KOG3140 Predicted membrane protein, at 1235999 to 1237638 13259 mRNA_4892: 13260 - K00915 IPMK, IPK2 inositol-polyphosphate multikinase, at 1237907 to 1239157 13260 mRNA_4893: 13261 - Hypothetical Protein, at 1239240 to 1240302 13261 mRNA_4894: 13262 - K11187 PRDX5 peroxiredoxin 5, atypical 2-Cys peroxiredoxin, at 1240475 to 1241393 13262
Group Condition mRNA_4890 mRNA_4891 mRNA_4892 mRNA_4893 mRNA_4894
13258
13259
13260
13261
13262
ypd buoyancy 40 hrs No Buoyancy Separation   -1.1     -0.2
facs on lipid accumulation Sorted No BODIPY Gate   -0.4     -0.4
ypd buoyancy 40 hrs High Buoyancy   -1.1     0.5
growth on ricinoleic acid YNB Ricinoleic Acid   -0.2     -0.5
growth on ypd YPD   -0.5     -0.1
facs on lipid accumulation Sorted High BODIPY Gate   -0.1     -0.3
ypd buoyancy 40 hrs Low Buoyancy   -0.5     0.1
ypd buoyancy 40 hrs Median Buoyancy   -0.4     0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.1     -0.2
growth on oleic acid YNB Oleic Acid   0.3     -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.2     -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid   0.3     -0.1
facs on lipid accumulation Sorted Low BODIPY Gate   0.3     -0.0
growth on ricinoleic acid YNB Glucose   0.3     -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.5     -0.1
growth on oleic acid YNB Glucose   0.7     -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.7     -0.1
auxotrophy Dropout Complete   0.9     0.0
auxotrophy YNB Glucose   1.3     -0.1
auxotrophy YNB Glucose 75mM Methionine   1.4     -0.3
auxotrophy YNB Glucose 75mM Arginine   1.2     0.0
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