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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4890: 13258 - HMMPfam-SH3 domain-PF00018,HMMPfam-Cortical protein marker for cell polarity-PF12768,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044,SUPERFAMILY--SSF50965,SUPERFAMILY--SSF69322, at 1230459 to 1234781
13258
mRNA_4891: 13259 - KOG3140 Predicted membrane protein, at 1235999 to 1237638
13259
mRNA_4892: 13260 - K00915 IPMK, IPK2 inositol-polyphosphate multikinase, at 1237907 to 1239157
13260
mRNA_4893: 13261 - Hypothetical Protein, at 1239240 to 1240302
13261
mRNA_4894: 13262 - K11187 PRDX5 peroxiredoxin 5, atypical 2-Cys peroxiredoxin, at 1240475 to 1241393
13262
Group
Condition
mRNA_4890
mRNA_4891
mRNA_4892
mRNA_4893
mRNA_4894
13258
13259
13260
13261
13262
ypd buoyancy
40 hrs No Buoyancy Separation
-1.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.4
ypd buoyancy
40 hrs High Buoyancy
-1.1
0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.5
growth on ypd
YPD
-0.5
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.5
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.4
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.2
growth on oleic acid
YNB Oleic Acid
0.3
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-0.0
growth on ricinoleic acid
YNB Glucose
0.3
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.5
-0.1
growth on oleic acid
YNB Glucose
0.7
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.7
-0.1
auxotrophy
Dropout Complete
0.9
0.0
auxotrophy
YNB Glucose
1.3
-0.1
auxotrophy
YNB Glucose 75mM Methionine
1.4
-0.3
auxotrophy
YNB Glucose 75mM Arginine
1.2
0.0
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