Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4886: 13254 - Hypothetical Protein, at 1220843 to 1222544 13254 mRNA_4887: 13255 - K11365 SGF73 SAGA-associated factor 73, at 1222700 to 1223919 13255 mRNA_4888: 13256 - K20044 PICALM phosphatidylinositol-binding clathrin assembly protein, at 1224614 to 1227335 13256 mRNA_4889: 13257 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1227423 to 1230111 13257 mRNA_4890: 13258 - HMMPfam-SH3 domain-PF00018,HMMPfam-Cortical protein marker for cell polarity-PF12768,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044,SUPERFAMILY--SSF50965,SUPERFAMILY--SSF69322, at 1230459 to 1234781 13258
Group Condition mRNA_4886 mRNA_4887 mRNA_4888 mRNA_4889 mRNA_4890
13254
13255
13256
13257
13258
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.9 -0.2 -0.6  
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 0.7 -0.2 -1.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.3 -0.2 -0.2  
growth on ypd YPD 0.2 -0.0 -0.3 -0.1  
auxotrophy Dropout Complete 0.1 0.6 -0.3 -0.5  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.0 0.0 -0.3  
growth on ricinoleic acid YNB Glucose 0.1 -0.1 -0.2 0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.0 0.1 -0.3  
ypd buoyancy 40 hrs High Buoyancy -0.0 0.3 -0.4 0.1  
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.2 -0.2 0.2  
auxotrophy YNB Glucose 75mM Methionine 0.1 0.5 -0.3 -0.3  
facs on lipid accumulation Sorted No BODIPY Gate 0.5 0.1 0.2 -0.7  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.4 -0.2 -0.4  
auxotrophy YNB Glucose 0.5 0.1 -0.3 -0.0  
auxotrophy YNB Glucose 75mM Arginine 0.5 0.3 -0.2 -0.3  
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.7 -0.3 -0.0  
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 -0.1 -0.6 0.7  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 1.0 -0.5 -0.2  
growth on oleic acid YNB Glucose 0.7 0.1 -0.1 0.0  
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 0.9 0.0 -0.4  
growth on oleic acid YNB Oleic Acid 1.0 0.6 0.1 -0.1  
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