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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4881: 13249 - K01890 FARSB, pheT phenylalanyl-tRNA synthetase beta chain, at 1212662 to 1215264
13249
mRNA_4882: 13250 - Hypothetical Protein, at 1215756 to 1216865
13250
mRNA_4883: 13251 - HMMPfam-Uncharacterised protein family (UPF0203)-PF05254, at 1217167 to 1217657
13251
mRNA_4884: 13252 - K07555 ATPeAF1, ATPAF1, ATP11 ATP synthase mitochondrial F1 complex assembly factor 1, at 1218139 to 1219355
13252
mRNA_4885: 13253 - K03105 SRP19 signal recognition particle subunit SRP19, at 1219636 to 1220593
13253
Group
Condition
mRNA_4881
mRNA_4882
mRNA_4883
mRNA_4884
mRNA_4885
13249
13250
13251
13252
13253
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-2.7
ypd buoyancy
40 hrs Low Buoyancy
0.1
-1.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
0.4
growth on ricinoleic acid
YNB Glucose
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.6
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.5
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.5
auxotrophy
Dropout Complete
0.4
-0.6
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
auxotrophy
YNB Glucose
0.3
-0.4
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.6
-0.5
growth on oleic acid
YNB Oleic Acid
0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.5
-0.3
growth on oleic acid
YNB Glucose
0.3
0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.4
0.1
growth on ypd
YPD
0.2
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
0.4
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