Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4877: 13245 - KOG2533 Permease of the major facilitator superfamily, at 1201220 to 1203456 13245 mRNA_4878: 13246 - K04348 PPP3C, CNA serine/threonine-protein phosphatase 2B catalytic subunit, at 1204764 to 1207810 13246 mRNA_4879: 13247 - KOG1259 Nischarin, modulator of integrin alpha5 subunit action, at 1208439 to 1211006 13247 mRNA_4880: 13248 - K17795 TIM17 mitochondrial import inner membrane translocase subunit TIM17, at 1211374 to 1212342 13248 mRNA_4881: 13249 - K01890 FARSB, pheT phenylalanyl-tRNA synthetase beta chain, at 1212662 to 1215264 13249
Group Condition mRNA_4877 mRNA_4878 mRNA_4879 mRNA_4880 mRNA_4881
13245
13246
13247
13248
13249
facs on lipid accumulation Sorted Low BODIPY Gate -1.2 -1.0 0.5    
facs on lipid accumulation Sorted No BODIPY Gate -1.0 -0.5 -0.2    
facs on lipid accumulation Sorted High BODIPY Gate -0.9 0.2 -0.4    
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.5    
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 0.0 -0.3    
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.2 0.1    
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 0.8 -0.2    
ypd buoyancy 40 hrs No Buoyancy Separation 1.1 -1.1 0.0    
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 0.9 -0.1    
growth on ypd YPD -0.5 0.1 0.8    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 0.9 -0.3    
ypd buoyancy 40 hrs Low Buoyancy -0.5 1.0 0.3    
growth on oleic acid YNB Glucose -0.3 1.6 -0.1    
auxotrophy YNB Glucose 75mM Arginine -0.3 1.9 0.1    
auxotrophy YNB Glucose -0.4 2.1 0.1    
auxotrophy YNB Glucose 75mM Methionine -0.2 2.0 -0.0    
growth on oleic acid YNB Oleic Acid -0.4 2.4 -0.0    
growth on ricinoleic acid YNB Glucose 0.1 2.2 -0.2    
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 3.4 -1.3    
auxotrophy Dropout Complete -0.1 2.1 0.7    
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 3.7 -0.4    
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