Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4875: 13243 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 1195483 to 1197426 13243 mRNA_4876: 13244 - K20133 USP6NL USP6 N-terminal-like protein, at 1198224 to 1200676 13244 mRNA_4877: 13245 - KOG2533 Permease of the major facilitator superfamily, at 1201220 to 1203456 13245 mRNA_4878: 13246 - K04348 PPP3C, CNA serine/threonine-protein phosphatase 2B catalytic subunit, at 1204764 to 1207810 13246 mRNA_4879: 13247 - KOG1259 Nischarin, modulator of integrin alpha5 subunit action, at 1208439 to 1211006 13247
Group Condition mRNA_4875 mRNA_4876 mRNA_4877 mRNA_4878 mRNA_4879
13243
13244
13245
13246
13247
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.4 -0.9 0.2 -0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.0 -1.0 -0.5 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.6 -0.0 0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 -0.2 1.1 -1.1 0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.8 -0.1 -1.2 -1.0 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.9 -0.2 -0.2 0.9 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 0.1 -0.8 0.8 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.5 0.0 -0.1 -0.1 -0.5
ypd buoyancy 40 hrs High Buoyancy 0.2 0.0 -0.3 -0.2 0.1
growth on oleic acid YNB Glucose -0.8 -0.4 -0.3 1.6 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.3 -0.5 0.9 -0.1
growth on ypd YPD 0.2 0.3 -0.5 0.1 0.8
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.0 -0.5 1.0 0.3
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.4 -0.2 2.0 -0.0
growth on oleic acid YNB Oleic Acid -0.4 0.0 -0.4 2.4 -0.0
auxotrophy YNB Glucose -0.1 -0.0 -0.4 2.1 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 0.0 0.1 3.4 -1.3
growth on ricinoleic acid YNB Glucose -0.2 -0.1 0.1 2.2 -0.2
auxotrophy YNB Glucose 75mM Arginine 0.4 -0.1 -0.3 1.9 0.1
auxotrophy Dropout Complete -0.5 0.4 -0.1 2.1 0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 0.5 0.3 3.7 -0.4
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