Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4866: 13234 - KOG2881 Predicted membrane protein, at 1176473 to 1177592 13234 mRNA_4867: 13235 - K06634 CCNH cyclin H, at 1177691 to 1179183 13235 mRNA_4868: 13236 - HMMPfam-DASH complex subunit Dad1-PF08649, at 1179404 to 1180039 13236 mRNA_4869: 13237 - K03364 CDH1 cell division cycle 20-like protein 1, cofactor of APC complex, at 1180583 to 1182754 13237 mRNA_4870: 13238 - KOG2533 Permease of the major facilitator superfamily, at 1183221 to 1185751 13238
Group Condition mRNA_4866 mRNA_4867 mRNA_4868 mRNA_4869 mRNA_4870
13234
13235
13236
13237
13238
ypd buoyancy 40 hrs No Buoyancy Separation -2.5     -0.0 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.4     -1.3 0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1     -1.0 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.5     -0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.7     -0.5 0.4
growth on ypd YPD -0.2     -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.1     -0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.2     0.0 -0.1
growth on ricinoleic acid YNB Glucose 1.2     -0.4 -0.5
growth on oleic acid YNB Glucose 0.4     0.1 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.0     -0.4 0.0
auxotrophy Dropout Complete -0.1     0.6 0.1
auxotrophy YNB Glucose 0.5     0.6 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.3     0.6 0.3
auxotrophy YNB Glucose 75mM Methionine 0.5     0.7 0.1
growth on oleic acid YNB Oleic Acid 1.0     0.7 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 1.5     0.3 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 1.6     0.7 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 2.1     0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.9     0.6 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 2.7     0.5 -0.2
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