Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4860: 13228 - K13237 DECR2 peroxisomal 2,4-dienoyl-CoA reductase, at 1164128 to 1165413 13228 mRNA_4861: 13229 - BLAST NADH-ubiquinone oxidoreductase [Sanghuangporus baumii], at 1165741 to 1167081 13229 mRNA_4862: 13230 - K00817 hisC histidinol-phosphate aminotransferase, at 1167194 to 1168610 13230 mRNA_4863: 13231 - KOG0645 WD40 repeat protein, at 1168828 to 1170396 13231 mRNA_4864: 13232 - KOG0603 Ribosomal protein S6 kinase, at 1170543 to 1172403 13232
Group Condition mRNA_4860 mRNA_4861 mRNA_4862 mRNA_4863 mRNA_4864
13228
13229
13230
13231
13232
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.8     -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 -0.8     -0.2
growth on ypd YPD -0.2 -0.2     -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.7     0.4
auxotrophy Dropout Complete -0.1 -0.6     0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.5     0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -1.0     0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.3     0.2
auxotrophy YNB Glucose -0.3 -0.3     0.4
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.0     -0.2
growth on oleic acid YNB Oleic Acid -0.1 0.3     -0.3
growth on ricinoleic acid YNB Glucose -0.5 -0.1     0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.3     0.7
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.0     0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 0.0     0.4
growth on oleic acid YNB Glucose -0.1 0.5     -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.0     0.3
ypd buoyancy 40 hrs High Buoyancy 0.3 0.1     0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.1     0.5
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.3     0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.4 0.9     0.0
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