Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4859: 13227 - Hypothetical Protein, at 1163089 to 1163880 13227 mRNA_4860: 13228 - K13237 DECR2 peroxisomal 2,4-dienoyl-CoA reductase, at 1164128 to 1165413 13228 mRNA_4861: 13229 - BLAST NADH-ubiquinone oxidoreductase [Sanghuangporus baumii], at 1165741 to 1167081 13229 mRNA_4862: 13230 - K00817 hisC histidinol-phosphate aminotransferase, at 1167194 to 1168610 13230 mRNA_4863: 13231 - KOG0645 WD40 repeat protein, at 1168828 to 1170396 13231
Group Condition mRNA_4859 mRNA_4860 mRNA_4861 mRNA_4862 mRNA_4863
13227
13228
13229
13230
13231
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.1 -1.0    
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.3 -0.7    
auxotrophy Dropout Complete -0.1 -0.1 -0.6    
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 0.3 -0.8    
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.1 -0.8    
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 -0.4 -0.5    
growth on ricinoleic acid YNB Glucose -0.1 -0.5 -0.1    
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 0.2 -0.1    
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.2 -0.3    
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 -0.3 -0.3    
growth on ypd YPD 0.1 -0.2 -0.2    
auxotrophy YNB Glucose 0.4 -0.3 -0.3    
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.2 0.0    
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.1 -0.0    
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.0 0.3    
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.0 0.0    
auxotrophy YNB Glucose 75mM Methionine 0.0 0.0 -0.0    
growth on oleic acid YNB Glucose 0.1 -0.1 0.5    
growth on oleic acid YNB Oleic Acid 0.3 -0.1 0.3    
ypd buoyancy 40 hrs High Buoyancy 0.2 0.3 0.1    
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.4 0.9    
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