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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4850: 13218 - K02309 DBF4 regulatory subunit for Cdc7p protein kinase, at 1143914 to 1146258
13218
mRNA_4851: 13219 - K06679 MAD1 mitotic spindle assembly checkpoint protein MAD1, at 1146547 to 1149479
13219
mRNA_4852: 13220 - Hypothetical Protein, at 1149636 to 1152739
13220
mRNA_4853: 13221 - Hypothetical Protein, at 1153001 to 1154455
13221
mRNA_4854: 13222 - ProSiteProfiles-BTB domain profile.-PS50097, at 1155001 to 1156417
13222
Group
Condition
mRNA_4850
mRNA_4851
mRNA_4852
mRNA_4853
mRNA_4854
13218
13219
13220
13221
13222
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
-0.3
-0.9
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.1
0.4
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.4
-0.1
0.0
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.3
-0.1
0.6
ypd buoyancy
40 hrs Low Buoyancy
0.0
-0.2
-0.1
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
-0.3
0.4
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.1
0.3
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
0.1
0.1
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.1
0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.2
0.0
-0.2
0.5
growth on ypd
YPD
-0.3
0.1
0.9
-0.2
auxotrophy
Dropout Complete
-0.1
-0.0
-0.0
0.7
auxotrophy
YNB Glucose
-0.1
-0.1
-0.1
0.9
growth on oleic acid
YNB Glucose
0.0
-0.1
0.3
0.4
growth on oleic acid
YNB Oleic Acid
0.1
-0.0
0.2
0.6
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.1
0.1
0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
0.0
0.3
0.8
ypd buoyancy
40 hrs Median Buoyancy
0.3
0.2
0.4
0.3
growth on ricinoleic acid
YNB Glucose
0.1
-0.3
0.6
0.8
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.6
-0.1
0.4
0.7
ypd buoyancy
40 hrs No Buoyancy Separation
1.0
0.2
-0.0
0.5
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