Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4849: 13217 - HMMPfam-FAD binding domain-PF01565,HMMPfam-Berberine and berberine like-PF08031,ProSitePatterns-Oxygen oxidoreductases covalent FAD-binding site.-PS00862,ProSiteProfiles-PCMH-type FAD-binding domain profile.-PS51387,SUPERFAMILY--SSF56176, at 1141315 to 1143566 13217 mRNA_4850: 13218 - K02309 DBF4 regulatory subunit for Cdc7p protein kinase, at 1143914 to 1146258 13218 mRNA_4851: 13219 - K06679 MAD1 mitotic spindle assembly checkpoint protein MAD1, at 1146547 to 1149479 13219 mRNA_4852: 13220 - Hypothetical Protein, at 1149636 to 1152739 13220 mRNA_4853: 13221 - Hypothetical Protein, at 1153001 to 1154455 13221
Group Condition mRNA_4849 mRNA_4850 mRNA_4851 mRNA_4852 mRNA_4853
13217
13218
13219
13220
13221
facs on lipid accumulation Sorted High BODIPY Gate 0.1   -0.7 -0.3 -0.9
ypd buoyancy 40 hrs Low Buoyancy -0.3   0.0 -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.0   -0.2 -0.3 -0.1
auxotrophy YNB Glucose -0.2   -0.1 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.5   -0.2 0.1 0.1
auxotrophy Dropout Complete -0.2   -0.1 -0.0 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.3   0.2 0.0 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3   -0.1 -0.1 0.3
auxotrophy YNB Glucose 75mM Arginine 0.1   -0.1 0.1 0.1
growth on oleic acid YNB Glucose 0.1   0.0 -0.1 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.0   0.1 0.0 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1   0.4 -0.3 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2   0.4 -0.1 0.0
growth on oleic acid YNB Oleic Acid 0.3   0.1 -0.0 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1   -0.1 0.1 0.4
ypd buoyancy 40 hrs Median Buoyancy -0.2   0.3 0.2 0.4
growth on ricinoleic acid YNB Glucose 0.3   0.1 -0.3 0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.5   1.0 0.2 -0.0
growth on ypd YPD 0.1   -0.3 0.1 0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3   0.1 0.1 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2   0.6 -0.1 0.4
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