Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4847: 13215 - Hypothetical Protein, at 1133572 to 1137413 13215 mRNA_4848: 13216 - Hypothetical Protein, at 1137464 to 1141122 13216 mRNA_4849: 13217 - HMMPfam-FAD binding domain-PF01565,HMMPfam-Berberine and berberine like-PF08031,ProSitePatterns-Oxygen oxidoreductases covalent FAD-binding site.-PS00862,ProSiteProfiles-PCMH-type FAD-binding domain profile.-PS51387,SUPERFAMILY--SSF56176, at 1141315 to 1143566 13217 mRNA_4850: 13218 - K02309 DBF4 regulatory subunit for Cdc7p protein kinase, at 1143914 to 1146258 13218 mRNA_4851: 13219 - K06679 MAD1 mitotic spindle assembly checkpoint protein MAD1, at 1146547 to 1149479 13219
Group Condition mRNA_4847 mRNA_4848 mRNA_4849 mRNA_4850 mRNA_4851
13215
13216
13217
13218
13219
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.2 0.1   -0.7
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.0 -0.5   -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.2 -0.3   0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.1 -0.3   -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -0.3   0.2
auxotrophy Dropout Complete 0.1 -0.1 -0.2   -0.1
auxotrophy YNB Glucose 0.1 0.1 -0.2   -0.1
growth on ypd YPD 0.0 0.1 0.1   -0.3
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.0 0.1   -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.3 -0.5   1.0
auxotrophy YNB Glucose 75mM Methionine 0.1 0.1 0.0   -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.1 -0.2   0.3
growth on oleic acid YNB Glucose 0.0 -0.1 0.1   0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.0 0.1   -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.2 0.0   0.1
growth on oleic acid YNB Oleic Acid 0.0 0.1 0.3   0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.0 -0.1   0.4
growth on ricinoleic acid YNB Glucose 0.0 0.1 0.3   0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.1 0.3   0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.0 0.2   0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.1 0.2   0.6
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