Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4833: 13201 - K05755 ARPC4 actin related protein 2/3 complex, subunit 4, at 1110819 to 1111714 13201 mRNA_4834: 13202 - K02996 RP-S9, MRPS9, rpsI small subunit ribosomal protein S9, at 1112010 to 1113278 13202 mRNA_4835: 13203 - KOG0490 Transcription factor, contains HOX domain, at 1114213 to 1116199 13203 mRNA_4836: 13204 - BLAST NEK protein kinase [Microbotryum lychnidis-dioicae p1..., at 1116510 to 1117726 13204 mRNA_4837: 13205 - K20872 NEK2 NIMA (never in mitosis gene a)-related kinase 2, at 1117743 to 1117911 13205
Group Condition mRNA_4833 mRNA_4834 mRNA_4835 mRNA_4836 mRNA_4837
13201
13202
13203
13204
13205
ypd buoyancy 40 hrs No Buoyancy Separation     0.1 -1.9  
buoyancy on lipid accumulation 40 hrs Low Buoyancy     -0.9 -0.5  
facs on lipid accumulation Sorted High BODIPY Gate     -0.3 -0.4  
growth on ypd YPD     0.1 -0.7  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     -0.6 0.0  
growth on ricinoleic acid YNB Ricinoleic Acid     0.1 -0.6  
buoyancy on lipid accumulation 40 hrs High Buoyancy     -0.8 0.3  
growth on ricinoleic acid YNB Glucose     -0.1 -0.2  
auxotrophy YNB Glucose     -0.2 -0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy     -0.4 0.2  
growth on oleic acid YNB Oleic Acid     -0.2 0.0  
growth on oleic acid YNB Glucose     -0.2 0.1  
facs on lipid accumulation Sorted No BODIPY Gate     -0.1 0.1  
auxotrophy YNB Glucose 75mM Methionine     0.0 0.2  
auxotrophy YNB Glucose 75mM Arginine     -0.1 0.4  
growth on ricinoleic acid YNB Methylricinoleic Acid     0.4 -0.1  
ypd buoyancy 40 hrs Low Buoyancy     0.3 0.2  
facs on lipid accumulation Sorted Low BODIPY Gate     -0.1 0.8  
auxotrophy Dropout Complete     0.1 0.6  
ypd buoyancy 40 hrs High Buoyancy     0.3 0.6  
ypd buoyancy 40 hrs Median Buoyancy     0.4 0.5  
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