Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4832: 13200 - KOG4168 Predicted RNA polymerase III subunit C17, at 1109759 to 1110628 13200 mRNA_4833: 13201 - K05755 ARPC4 actin related protein 2/3 complex, subunit 4, at 1110819 to 1111714 13201 mRNA_4834: 13202 - K02996 RP-S9, MRPS9, rpsI small subunit ribosomal protein S9, at 1112010 to 1113278 13202 mRNA_4835: 13203 - KOG0490 Transcription factor, contains HOX domain, at 1114213 to 1116199 13203 mRNA_4836: 13204 - BLAST NEK protein kinase [Microbotryum lychnidis-dioicae p1..., at 1116510 to 1117726 13204
Group Condition mRNA_4832 mRNA_4833 mRNA_4834 mRNA_4835 mRNA_4836
13200
13201
13202
13203
13204
ypd buoyancy 40 hrs No Buoyancy Separation       0.1 -1.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy       -0.9 -0.5
facs on lipid accumulation Sorted High BODIPY Gate       -0.3 -0.4
growth on ypd YPD       0.1 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation       -0.6 0.0
growth on ricinoleic acid YNB Ricinoleic Acid       0.1 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy       -0.8 0.3
growth on ricinoleic acid YNB Glucose       -0.1 -0.2
auxotrophy YNB Glucose       -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy       -0.4 0.2
growth on oleic acid YNB Oleic Acid       -0.2 0.0
growth on oleic acid YNB Glucose       -0.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate       -0.1 0.1
auxotrophy YNB Glucose 75mM Methionine       0.0 0.2
auxotrophy YNB Glucose 75mM Arginine       -0.1 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid       0.4 -0.1
ypd buoyancy 40 hrs Low Buoyancy       0.3 0.2
facs on lipid accumulation Sorted Low BODIPY Gate       -0.1 0.8
auxotrophy Dropout Complete       0.1 0.6
ypd buoyancy 40 hrs High Buoyancy       0.3 0.6
ypd buoyancy 40 hrs Median Buoyancy       0.4 0.5
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