Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4810: 13178 - KOG1304 Amino acid transporters, at 1068097 to 1069702 13178 mRNA_4811: 13179 - Hypothetical Protein, at 1070927 to 1071764 13179 mRNA_4812: 13180 - K15255 PIF1 ATP-dependent DNA helicase PIF1, at 1072334 to 1073346 13180 mRNA_4813: 13181 - Hypothetical Protein, at 1073710 to 1074508 13181 mRNA_4814: 13182 - HMMPfam-SnoaL-like domain-PF13577,SUPERFAMILY--SSF54427, at 1074739 to 1075935 13182
Group Condition mRNA_4810 mRNA_4811 mRNA_4812 mRNA_4813 mRNA_4814
13178
13179
13180
13181
13182
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1   -1.2   0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.2   0.3   -0.9
auxotrophy YNB Glucose 75mM Methionine 0.1   -0.2   -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1   -0.3   0.1
auxotrophy YNB Glucose 0.1   -0.0   -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0   -0.2   0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1   0.3   -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2   0.4   -0.2
auxotrophy Dropout Complete 0.1   0.5   -0.6
ypd buoyancy 40 hrs High Buoyancy -0.2   0.0   0.2
growth on ypd YPD -0.4   1.2   -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1   0.3   -0.3
growth on oleic acid YNB Glucose -0.3   0.5   -0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.2   0.3   -0.2
growth on oleic acid YNB Oleic Acid -0.3   0.5   0.1
ypd buoyancy 40 hrs Low Buoyancy 0.0   0.2   0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2   0.1   0.1
growth on ricinoleic acid YNB Glucose 0.2   0.1   0.2
ypd buoyancy 40 hrs Median Buoyancy 0.1   0.5   0.2
auxotrophy YNB Glucose 75mM Arginine 0.1   0.8   -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.1   1.2   -0.1
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