Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4755: 13123 - Hypothetical Protein, at 934483 to 935126 13123 mRNA_4756: 13124 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047, at 935432 to 936982 13124 mRNA_4757: 13125 - Hypothetical Protein, at 937399 to 937793 13125 mRNA_4758: 13126 - HMMPfam-Autophagy-related protein 27-PF09451,SUPERFAMILY--SSF50911, at 938067 to 939280 13126 mRNA_4759: 13127 - HMMPfam-Fungal cellulose binding domain-PF00734,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180, at 940381 to 941157 13127
Group Condition mRNA_4755 mRNA_4756 mRNA_4757 mRNA_4758 mRNA_4759
13123
13124
13125
13126
13127
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.0 -0.3 0.0 0.4
ypd buoyancy 40 hrs No Buoyancy Separation 0.8 -0.6 -0.6 0.0 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.5 -0.0 -0.2 0.3 -0.6
auxotrophy YNB Glucose 75mM Arginine -0.3 0.2 -0.1 0.1 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 -0.1 -0.2 0.0 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.7 -0.4 -0.3 0.3 -0.2
growth on ypd YPD -0.2 0.1 0.4 -0.1 0.0
ypd buoyancy 40 hrs High Buoyancy 0.3 0.2 -0.1 0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.0 -0.1 0.1 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6 0.1 -0.4 0.4 -0.4
growth on ricinoleic acid YNB Glucose 0.1 0.3 -0.2 0.1 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.2 0.1 -0.2 0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.0 0.6 -0.2 -0.1
growth on oleic acid YNB Oleic Acid -0.2 0.3 -0.1 -0.2 0.6
growth on oleic acid YNB Glucose -0.0 0.3 0.2 -0.1 0.2
auxotrophy Dropout Complete 0.2 0.3 0.1 -0.0 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 0.2 0.7 -0.0 0.2
auxotrophy YNB Glucose 75mM Methionine 0.1 0.0 0.1 0.1 0.5
auxotrophy YNB Glucose -0.1 0.3 0.1 0.2 0.5
facs on lipid accumulation Sorted High BODIPY Gate 0.5 -0.2 0.6 -0.2 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 0.6 0.1 -0.1 0.5
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