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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4755: 13123 - Hypothetical Protein, at 934483 to 935126
13123
mRNA_4756: 13124 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047, at 935432 to 936982
13124
mRNA_4757: 13125 - Hypothetical Protein, at 937399 to 937793
13125
mRNA_4758: 13126 - HMMPfam-Autophagy-related protein 27-PF09451,SUPERFAMILY--SSF50911, at 938067 to 939280
13126
mRNA_4759: 13127 - HMMPfam-Fungal cellulose binding domain-PF00734,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180, at 940381 to 941157
13127
Group
Condition
mRNA_4755
mRNA_4756
mRNA_4757
mRNA_4758
mRNA_4759
13123
13124
13125
13126
13127
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.0
-0.3
0.0
0.4
ypd buoyancy
40 hrs No Buoyancy Separation
0.8
-0.6
-0.6
0.0
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.5
-0.0
-0.2
0.3
-0.6
auxotrophy
YNB Glucose 75mM Arginine
-0.3
0.2
-0.1
0.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.5
-0.1
-0.2
0.0
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.7
-0.4
-0.3
0.3
-0.2
growth on ypd
YPD
-0.2
0.1
0.4
-0.1
0.0
ypd buoyancy
40 hrs High Buoyancy
0.3
0.2
-0.1
0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.0
-0.1
0.1
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.6
0.1
-0.4
0.4
-0.4
growth on ricinoleic acid
YNB Glucose
0.1
0.3
-0.2
0.1
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
0.2
0.1
-0.2
0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.0
0.6
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
-0.2
0.3
-0.1
-0.2
0.6
growth on oleic acid
YNB Glucose
-0.0
0.3
0.2
-0.1
0.2
auxotrophy
Dropout Complete
0.2
0.3
0.1
-0.0
0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
0.2
0.7
-0.0
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.0
0.1
0.1
0.5
auxotrophy
YNB Glucose
-0.1
0.3
0.1
0.2
0.5
facs on lipid accumulation
Sorted High BODIPY Gate
0.5
-0.2
0.6
-0.2
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
0.6
0.1
-0.1
0.5
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