Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4752: 13120 - KOG1263 Multicopper oxidases, at 922993 to 927297 13120 mRNA_4753: 13121 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 927583 to 931061 13121 mRNA_4754: 13122 - ProSiteProfiles-F-box domain profile.-PS50181, at 931606 to 933249 13122 mRNA_4755: 13123 - Hypothetical Protein, at 934483 to 935126 13123 mRNA_4756: 13124 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047, at 935432 to 936982 13124
Group Condition mRNA_4752 mRNA_4753 mRNA_4754 mRNA_4755 mRNA_4756
13120
13121
13122
13123
13124
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 -0.0 -0.3 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 0.0 0.2 0.8 -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.1 0.1 -0.3 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.0 0.1 -0.3 0.2
growth on ypd YPD 0.4 -0.0 -0.1 -0.2 0.1
growth on oleic acid YNB Oleic Acid -0.2 0.1 0.3 -0.2 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 -0.1 0.2 -0.2 0.2
auxotrophy YNB Glucose 0.1 0.1 -0.0 -0.1 0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.0 0.3 0.2 0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.1 0.0 0.5 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.0 0.2 0.1 0.0
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.1 0.1 0.0 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 0.1 0.1 0.7 -0.4
growth on oleic acid YNB Glucose 0.1 -0.0 0.3 -0.0 0.3
auxotrophy Dropout Complete 0.1 -0.0 -0.0 0.2 0.3
growth on ricinoleic acid YNB Glucose 0.3 -0.0 0.1 0.1 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.2 -0.0 0.5 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.2 0.0 0.2 0.3 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.2 0.2 0.5 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.2 0.1 0.6 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.1 0.2 0.4 0.6
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