Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
500 nt
mRNA_4749: 13117 - SUPERFAMILY--SSF52047, at 917502 to 919114
13117
mRNA_4750: 13118 - Hypothetical Protein, at 919411 to 921092
13118
mRNA_4751: 13119 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 921381 to 922742
13119
mRNA_4752: 13120 - KOG1263 Multicopper oxidases, at 922993 to 927297
13120
mRNA_4753: 13121 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 927583 to 931061
13121
Group
Condition
mRNA_4749
mRNA_4750
mRNA_4751
mRNA_4752
mRNA_4753
13117
13118
13119
13120
13121
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
0.3
-0.5
-0.6
0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.5
-0.9
-0.2
-0.0
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
-0.4
-0.6
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
0.0
-0.1
-0.1
-0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.0
-0.2
-0.0
0.1
auxotrophy
Dropout Complete
-0.2
0.1
-0.2
0.1
-0.0
growth on oleic acid
YNB Oleic Acid
0.3
0.2
-0.3
-0.2
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
-0.3
0.1
-0.1
-0.0
growth on ypd
YPD
-0.4
-0.1
0.1
0.4
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.0
-0.0
0.1
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.1
-0.3
0.1
-0.0
growth on oleic acid
YNB Glucose
0.1
0.0
-0.1
0.1
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
0.3
-0.0
0.0
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.3
-0.5
0.1
-0.1
auxotrophy
YNB Glucose
0.1
0.0
-0.2
0.1
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.5
-0.3
0.0
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
0.1
-0.2
0.1
0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.2
0.0
0.1
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.6
0.0
0.2
0.0
growth on ricinoleic acid
YNB Glucose
0.0
0.6
-0.3
0.3
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.8
0.4
-0.3
0.1
0.1
remove
mRNA_4749
plot
remove
mRNA_4750
plot
remove
mRNA_4751
remove
mRNA_4752
plot
remove
mRNA_4753
plot