Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4749: 13117 - SUPERFAMILY--SSF52047, at 917502 to 919114 13117 mRNA_4750: 13118 - Hypothetical Protein, at 919411 to 921092 13118 mRNA_4751: 13119 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 921381 to 922742 13119 mRNA_4752: 13120 - KOG1263 Multicopper oxidases, at 922993 to 927297 13120 mRNA_4753: 13121 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 927583 to 931061 13121
Group Condition mRNA_4749 mRNA_4750 mRNA_4751 mRNA_4752 mRNA_4753
13117
13118
13119
13120
13121
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 0.3 -0.5 -0.6 0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.5 -0.9 -0.2 -0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 -0.4 -0.6 -0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.1 -0.1 -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 -0.2 -0.0 0.1
auxotrophy Dropout Complete -0.2 0.1 -0.2 0.1 -0.0
growth on oleic acid YNB Oleic Acid 0.3 0.2 -0.3 -0.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.3 -0.3 0.1 -0.1 -0.0
growth on ypd YPD -0.4 -0.1 0.1 0.4 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.0 -0.0 0.1 0.2
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.1 -0.3 0.1 -0.0
growth on oleic acid YNB Glucose 0.1 0.0 -0.1 0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.3 -0.0 0.0 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.3 -0.5 0.1 -0.1
auxotrophy YNB Glucose 0.1 0.0 -0.2 0.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.5 -0.3 0.0 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 0.1 -0.2 0.1 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.2 0.0 0.1 0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 0.6 0.0 0.2 0.0
growth on ricinoleic acid YNB Glucose 0.0 0.6 -0.3 0.3 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.8 0.4 -0.3 0.1 0.1
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