Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4732: 13100 - HMMPfam-Major intrinsic protein-PF00230,PRINTS-Major intrinsic protein family signature-PR00783,SUPERFAMILY--SSF81338, at 879432 to 880805 13100 mRNA_4733: 13101 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 881363 to 882284 13101 mRNA_4734: 13102 - Hypothetical Protein, at 883185 to 884845 13102 mRNA_4735: 13103 - K03654 recQ ATP-dependent DNA helicase RecQ, at 885330 to 888560 13103 mRNA_4736: 13104 - K02503 HINT1, hinT, hit histidine triad (HIT) family protein, at 888664 to 889665 13104
Group Condition mRNA_4732 mRNA_4733 mRNA_4734 mRNA_4735 mRNA_4736
13100
13101
13102
13103
13104
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -1.2 0.6 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.8 0.2 -0.0 0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.8 0.4 0.0 0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 0.4 -0.4 -0.5 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.5 0.5 -0.2 0.2
growth on oleic acid YNB Oleic Acid -0.1 -0.1 0.0 -0.1 0.1
auxotrophy Dropout Complete -0.3 -0.3 0.3 0.1 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.3 0.1 -0.4 0.3
ypd buoyancy 40 hrs High Buoyancy 0.0 0.4 -0.0 -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 0.2 0.3 0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.3 0.4 0.1 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.1 0.4 0.1 0.3
growth on oleic acid YNB Glucose 0.1 -0.0 0.1 0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.2 -0.0 -0.1 0.2
auxotrophy YNB Glucose -0.4 0.0 0.3 0.3 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.1 0.3 0.0 0.6
auxotrophy YNB Glucose 75mM Methionine -0.4 0.4 0.3 0.2 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 0.4 0.6 0.3 0.1
growth on ricinoleic acid YNB Glucose -0.3 0.5 0.6 0.4 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.7 0.7 0.3 0.0
growth on ypd YPD 0.3 0.5 0.9 0.2 0.8
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