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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4718: 13086 - HMMPfam-Thaumatin family-PF00314,PRINTS-Pathogenesis-related protein signature-PR00347,ProSitePatterns-Thaumatin family signature.-PS00316,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 846943 to 849026
13086
mRNA_4719: 13087 - K18693 DPP1 diacylglycerol diphosphate phosphatase / phosphatidate phosphatase, at 849310 to 850936
13087
mRNA_4720: 13088 - K01415 ECE endothelin-converting enzyme, at 851220 to 854422
13088
mRNA_4721: 13089 - K10643 CNOT4, NOT4, MOT2 CCR4-NOT transcription complex subunit 4, at 854665 to 858103
13089
mRNA_4722: 13090 - K01027 OXCT 3-oxoacid CoA-transferase, at 858449 to 860854
13090
Group
Condition
mRNA_4718
mRNA_4719
mRNA_4720
mRNA_4721
mRNA_4722
13086
13087
13088
13089
13090
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.2
-0.3
-2.8
0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
0.1
-0.2
-3.6
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
0.1
0.1
-3.6
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
-0.1
-0.1
-3.0
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
0.1
-0.3
-1.9
0.0
auxotrophy
Dropout Complete
-0.3
0.5
-0.1
-2.1
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.2
-0.1
-1.7
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
0.1
0.0
-1.7
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.0
-0.1
-0.5
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
-0.2
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.0
-0.0
-0.5
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.0
-0.3
-0.1
-0.1
growth on ypd
YPD
0.1
0.1
0.2
-0.8
0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
0.4
0.1
-0.6
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.0
-0.1
0.1
0.2
ypd buoyancy
40 hrs High Buoyancy
0.2
0.1
-0.2
0.6
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.1
0.1
0.2
0.0
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.1
-0.1
0.7
-0.2
auxotrophy
YNB Glucose
0.0
0.2
-0.2
0.7
-0.0
growth on oleic acid
YNB Glucose
-0.2
0.4
0.1
0.3
0.1
growth on oleic acid
YNB Oleic Acid
0.0
0.2
-0.2
1.8
0.0
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