Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4716: 13084 - SUPERFAMILY--SSF55753, at 841773 to 842668 13084 mRNA_4717: 13085 - BLAST putative proteasome regulatory subunit 12 [Rhizoctoni..., at 844086 to 846101 13085 mRNA_4718: 13086 - HMMPfam-Thaumatin family-PF00314,PRINTS-Pathogenesis-related protein signature-PR00347,ProSitePatterns-Thaumatin family signature.-PS00316,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 846943 to 849026 13086 mRNA_4719: 13087 - K18693 DPP1 diacylglycerol diphosphate phosphatase / phosphatidate phosphatase, at 849310 to 850936 13087 mRNA_4720: 13088 - K01415 ECE endothelin-converting enzyme, at 851220 to 854422 13088
Group Condition mRNA_4716 mRNA_4717 mRNA_4718 mRNA_4719 mRNA_4720
13084
13085
13086
13087
13088
ypd buoyancy 40 hrs No Buoyancy Separation -3.6 0.1 -0.2 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.2 -0.0 -0.0 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.4 -0.2 0.4 0.1
growth on ricinoleic acid YNB Glucose 0.4 -0.5 -0.1 0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.0 0.1 0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -0.1 -0.0 -0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0 0.1 0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.2 0.2 0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine 0.3 -0.4 -0.2 0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.0 0.1 0.1 -0.1
auxotrophy Dropout Complete 0.1 -0.3 -0.3 0.5 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.2 -0.1 -0.1 -0.2
auxotrophy YNB Glucose 0.4 -0.4 0.0 0.2 -0.2
growth on ypd YPD -0.3 0.0 0.1 0.1 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.1 0.1 0.1 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 -0.1 0.1 0.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.1 0.0 0.1 0.0
growth on oleic acid YNB Oleic Acid 0.3 0.5 0.0 0.2 -0.2
growth on oleic acid YNB Glucose 0.4 0.1 -0.2 0.4 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.8 0.0 0.3 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.6 0.3 0.4 0.1 -0.2
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